Difference between revisions of "FSU RS13360"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction ACETATE--COA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1] * direction: ** left-to-right == Reaction formula...")
(Created page with "Category:reaction == Reaction RXN-16631 == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59] * direction: ** left-to-right * common-name: ** 3-hydroxyacyl...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ACETATE--COA-LIGASE-RXN ==
+
== Reaction RXN-16631 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
+
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3-hydroxyacyl-acp dehydratase fabz
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACET]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[3R-11Z-3-hydroxy-icos-11-enoyl-ACPs]][c] '''=>''' 1 [[2E-11Z-icosa-2-11-dienoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01410]]
+
* Gene: [[FSU_RS00310]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS15220]]
+
* Gene: [[FISUC_RS14115]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7118]], chitin degradation to ethanol:
+
* [[PWY-7663]], gondoate biosynthesis (anaerobic):
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY0-1313]], acetate conversion to acetyl-CoA:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY66-21]], ethanol degradation II:
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-162]], ethanol degradation IV:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY66-161]], ethanol degradation III:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-6672]], cis-genanyl-CoA degradation:
 
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: ec-number=ec-4.2.1.59}}
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23176 23176]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00235 R00235]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P27095 P27095]
 
−
** [http://www.uniprot.org/uniprot/P31638 P31638]
 
−
** [http://www.uniprot.org/uniprot/Q12662 Q12662]
 
−
** [http://www.uniprot.org/uniprot/P28812 P28812]
 
−
** [http://www.uniprot.org/uniprot/P27550 P27550]
 
−
** [http://www.uniprot.org/uniprot/O34613 O34613]
 
−
** [http://www.uniprot.org/uniprot/Q9PMD2 Q9PMD2]
 
−
** [http://www.uniprot.org/uniprot/P36333 P36333]
 
−
** [http://www.uniprot.org/uniprot/Q01574 Q01574]
 
−
** [http://www.uniprot.org/uniprot/P39062 P39062]
 
−
** [http://www.uniprot.org/uniprot/Q01576 Q01576]
 
−
** [http://www.uniprot.org/uniprot/P52910 P52910]
 
−
** [http://www.uniprot.org/uniprot/Q55404 Q55404]
 
−
** [http://www.uniprot.org/uniprot/P16928 P16928]
 
−
** [http://www.uniprot.org/uniprot/P16929 P16929]
 
−
** [http://www.uniprot.org/uniprot/O68040 O68040]
 
−
** [http://www.uniprot.org/uniprot/P78773 P78773]
 
−
</div>
 
−
{{#set: ec-number=ec-6.2.1.1}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 +
{{#set: common-name=3-hydroxyacyl-acp dehydratase fabz}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ecoli}}
+
{{#set: reconstruction source=genome}}

Revision as of 17:57, 22 September 2020

Reaction RXN-16631

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-acp dehydratase fabz

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7663, gondoate biosynthesis (anaerobic):
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS13360&oldid=29197"