Difference between revisions of "CPD-18808"
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(Created page with "Category:gene == Gene FISUC_RS10830 == * transcription-direction: ** positive * centisome-position: ** 69.32956 * left-end-position: ** 2664082 * right-end-position: *...") |
(Created page with "Category:gene == Gene FSU_RS08510 == * transcription-direction: ** negative * centisome-position: ** 54.283344 * left-end-position: ** 2086111 * right-end-position: **...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene FSU_RS08510 == |
* transcription-direction: | * transcription-direction: | ||
− | ** | + | ** negative |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 54.283344 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 2086111 |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 2087514 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[ | + | * [[fibrobacter_23092020]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[PHOSACETYLTRANS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | {{#set: transcription-direction= | + | ** Category: [[orthology]] |
− | {{#set: centisome-position= | + | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a |
− | {{#set: left-end-position= | + | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a |
− | {{#set: right-end-position= | + | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a |
− | {{#set: organism associated= | + | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
− | {{#set: nb reaction associated= | + | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a |
+ | * [[PTAALT-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[PWY-6637]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-5482]] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[P3-PWY]] | ||
+ | ** '''2''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5485]] | ||
+ | ** '''4''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[FERMENTATION-PWY]] | ||
+ | ** '''14''' reactions found over '''16''' reactions in the full pathway | ||
+ | * [[METH-ACETATE-PWY]] | ||
+ | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY4LZ-257]] | ||
+ | ** '''9''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY0-1477]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-5497]] | ||
+ | ** '''7''' reactions found over '''24''' reactions in the full pathway | ||
+ | * [[P163-PWY]] | ||
+ | ** '''3''' reactions found over '''10''' reactions in the full pathway | ||
+ | * [[P161-PWY]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY0-1312]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''17''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-1281]] | ||
+ | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5437]] | ||
+ | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-7013]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=negative}} | ||
+ | {{#set: centisome-position=54.283344 }} | ||
+ | {{#set: left-end-position=2086111}} | ||
+ | {{#set: right-end-position=2087514}} | ||
+ | {{#set: organism associated=fibrobacter_23092020}} | ||
+ | {{#set: nb reaction associated=2}} | ||
+ | {{#set: nb pathway associated=16}} |
Revision as of 07:04, 24 September 2020
Contents
Gene FSU_RS08510
- transcription-direction:
- negative
- centisome-position:
- 54.283344
- left-end-position:
- 2086111
- right-end-position:
- 2087514
Organism(s) associated with this gene
Reaction(s) associated
- PHOSACETYLTRANS-RXN
- Category: annotation
- source: genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- Category: annotation
- PTAALT-RXN
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-6637
- 1 reactions found over 4 reactions in the full pathway
- PWY-5482
- 3 reactions found over 3 reactions in the full pathway
- P3-PWY
- 2 reactions found over 11 reactions in the full pathway
- PWY-5485
- 4 reactions found over 3 reactions in the full pathway
- FERMENTATION-PWY
- 14 reactions found over 16 reactions in the full pathway
- METH-ACETATE-PWY
- 2 reactions found over 6 reactions in the full pathway
- PWY4LZ-257
- 9 reactions found over 7 reactions in the full pathway
- PWY0-1477
- 4 reactions found over 5 reactions in the full pathway
- PWY-5497
- 7 reactions found over 24 reactions in the full pathway
- P163-PWY
- 3 reactions found over 10 reactions in the full pathway
- P161-PWY
- 4 reactions found over 5 reactions in the full pathway
- PWY0-1312
- 2 reactions found over 2 reactions in the full pathway
- P122-PWY
- 17 reactions found over 18 reactions in the full pathway
- PWY-1281
- 1 reactions found over 2 reactions in the full pathway
- PWY-5437
- 3 reactions found over 6 reactions in the full pathway
- PWY-7013
- 3 reactions found over 5 reactions in the full pathway