Difference between revisions of "RXN0-383"

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(Created page with "Category:reaction == Reaction RXN66-472 == * common-name: ** fatty aldehyde dehydrogenase * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: **...")
(Created page with "Category:reaction == Reaction RXN-1404 == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase == Rea...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN66-472 ==
+
== Reaction RXN-1404 ==
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* common-name:
 
−
** fatty aldehyde dehydrogenase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** nitrilase
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[2-Me-Branched-234-Sat-FALD]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[2-Me-Branched-234-Sat-FA]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS01755]]
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* Gene: [[FISUC_RS02085]]
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** Category: [[manual]]
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** Category: [[annotation]]
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS03965]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY66-387]], fatty acid α-oxidation II:
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* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack):
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** '''3''' reactions found over '''6''' reactions in the full pathway
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** '''1''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-581]], indole-3-acetate biosynthesis II:
 +
** '''2''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi):
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: common-name=fatty aldehyde dehydrogenase}}
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* RHEA:
−
{{#set: ec-number=ec-1.2.1.3}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
 +
{{#set: ec-number=ec-3.5.5.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=nitrilase}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb gene associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction tool=curation}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 07:12, 24 September 2020

Reaction RXN-1404

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • nitrilase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWYQT-4476, indole glucosinolate activation (herbivore attack):
    • 1 reactions found over 13 reactions in the full pathway
  • PWY-581, indole-3-acetate biosynthesis II:
    • 2 reactions found over 12 reactions in the full pathway
  • PWY-5026, indole-3-acetate biosynthesis V (bacteria and fungi):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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