Difference between revisions of "FSU RS13520"

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(Created page with "Category:reaction == Reaction FARNESYLTRANSTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.29 ec-2.5.1.29] * direction: ** left-to-right == Reaction...")
(Created page with "Category:reaction == Reaction RXN-14227 == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5] * direction: ** left-to-right * common-name: ** 5'/3'-nucleotid...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction FARNESYLTRANSTRANSFERASE-RXN ==
+
== Reaction RXN-14227 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.5.1.29 ec-2.5.1.29]
+
** [http://enzyme.expasy.org/EC/3.1.3.5 ec-3.1.3.5]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 5'/3'-nucleotidase sure
 +
** bifunctional metallophosphatase/5'-nucleotidase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[FARNESYL-PP]][c] '''=>''' 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[NICOTINATE_NUCLEOTIDE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-8259]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10165]]
+
* Gene: [[FSU_RS00535]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
−
* Gene: [[FSU_RS06175]]
+
* Gene: [[FISUC_RS01815]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14345]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS03695]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7720]], ophiobolin F biosynthesis:
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7736]], stellatic acid biosynthesis:
 
−
** '''4''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-5120]], geranylgeranyl diphosphate biosynthesis:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-7492]], paspaline biosynthesis:
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6691]], plaunotol biosynthesis:
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-7517]], brassicicene C biosynthesis:
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6659]], fusicoccin A biosynthesis:
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7721]], methyl phomopsenoate biosynthesis:
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17654 17654]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30938 30938]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R02061 R02061]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03346 R03346]
−
* UNIPROT:
+
{{#set: ec-number=ec-3.1.3.5}}
−
** [http://www.uniprot.org/uniprot/P39464 P39464]
 
−
** [http://www.uniprot.org/uniprot/P24322 P24322]
 
−
** [http://www.uniprot.org/uniprot/P80042 P80042]
 
−
** [http://www.uniprot.org/uniprot/Q12051 Q12051]
 
−
** [http://www.uniprot.org/uniprot/P95999 P95999]
 
−
** [http://www.uniprot.org/uniprot/P48368 P48368]
 
−
** [http://www.uniprot.org/uniprot/P93227 P93227]
 
−
** [http://www.uniprot.org/uniprot/P93228 P93228]
 
−
** [http://www.uniprot.org/uniprot/Q42698 Q42698]
 
−
** [http://www.uniprot.org/uniprot/Q43133 Q43133]
 
−
** [http://www.uniprot.org/uniprot/Q42866 Q42866]
 
−
** [http://www.uniprot.org/uniprot/P54976 P54976]
 
−
{{#set: ec-number=ec-2.5.1.29}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: common-name=5'/3'-nucleotidase sure|bifunctional metallophosphatase/5'-nucleotidase}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bthetaiotaomicron}}
+
{{#set: reconstruction source=genome}}

Revision as of 07:14, 24 September 2020

Reaction RXN-14227

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 5'/3'-nucleotidase sure
    • bifunctional metallophosphatase/5'-nucleotidase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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