Difference between revisions of "FSU RS04110"

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(Created page with "Category:reaction == Reaction 3.5.5.1-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase ==...")
(Created page with "Category:reaction == Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132] * direction: ** left-to-right == Reac...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 3.5.5.1-RXN ==
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== Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
+
** [http://enzyme.expasy.org/EC/1.1.1.132 ec-1.1.1.132]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** nitrilase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Nitriles]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[Carboxylates]][c]
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* 1 [[GDP-MANNOSE]][c] '''+''' 2 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CPD-1828]][c] '''+''' 2 [[NADH]][c] '''+''' 3 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS02085]]
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* Gene: [[FSU_RS06690]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
* Gene: [[FSU_RS03965]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-6073]], alginate biosynthesis I (algal):
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6082]], alginate biosynthesis II (bacterial):
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21724 21724]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21731 21731]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00540 R00540]
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** [http://www.genome.jp/dbget-bin/www_bget?R00880 R00880]
 
* UNIPROT:
 
* UNIPROT:
** [http://www.uniprot.org/uniprot/P10045 P10045]
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** [http://www.uniprot.org/uniprot/P11759 P11759]
** [http://www.uniprot.org/uniprot/P20960 P20960]
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{{#set: ec-number=ec-1.1.1.132}}
** [http://www.uniprot.org/uniprot/Q59329 Q59329]
 
** [http://www.uniprot.org/uniprot/P32961 P32961]
 
** [http://www.uniprot.org/uniprot/P32962 P32962]
 
** [http://www.uniprot.org/uniprot/Q55949 Q55949]
 
** [http://www.uniprot.org/uniprot/Q42965 Q42965]
 
** [http://www.uniprot.org/uniprot/Q42966 Q42966]
 
** [http://www.uniprot.org/uniprot/Q23384 Q23384]
 
** [http://www.uniprot.org/uniprot/P46010 P46010]
 
** [http://www.uniprot.org/uniprot/O04907 O04907]
 
** [http://www.uniprot.org/uniprot/P46011 P46011]
 
{{#set: ec-number=ec-3.5.5.1}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=nitrilase}}
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{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=2}}
{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_add_147_emile_annot}}
{{#set: reconstruction source=genome}}
 

Revision as of 07:18, 24 September 2020

Reaction GDP-MANNOSE-6-DEHYDROGENASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6073, alginate biosynthesis I (algal):
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6082, alginate biosynthesis II (bacterial):
    • 1 reactions found over 7 reactions in the full pathway

Reconstruction information

External links