Difference between revisions of "FISUC RS11670"

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(Created page with "Category:reaction == Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6] ** [http://enzyme.expasy.org/EC/2.6.1....")
(Created page with "Category:reaction == Reaction RXN-18446 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1] * direction: ** left-to-right == Reaction formula == * 1 [[ATP]...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction BRANCHED-CHAINAMINOTRANSFERLEU-RXN ==
+
== Reaction RXN-18446 ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.6.1.6 ec-2.6.1.6]
+
** [http://enzyme.expasy.org/EC/6.2.1.1 ec-6.2.1.1]
** [http://enzyme.expasy.org/EC/2.6.1.42 ec-2.6.1.42]
 
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** branched-chain amino acid aminotransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[LEU]][c] '''<=>''' 1 [[2K-4CH3-PENTANOATE]][c] '''+''' 1 [[GLT]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[ISOVALERATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS03245]]
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* Gene: [[FSU_RS01410]]
** Category: [[annotation]]
+
** Category: [[manual]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
* Gene: [[FSU_RS05135]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
** Category: [[orthology]]
 
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[LEU-DEG2-PWY]], L-leucine degradation I:
+
* [[PWY-5132]], lupulone and humulone biosynthesis:
 
** '''1''' reactions found over '''6''' reactions in the full pathway
 
** '''1''' reactions found over '''6''' reactions in the full pathway
* [[PWY-5076]], L-leucine degradation III:
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7767]], L-leucine degradation IV (Stickland reaction):
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
* [[LEUSYN-PWY]], L-leucine biosynthesis:
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
* RHEA:
+
{{#set: ec-number=ec-6.2.1.1}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18324 18324]
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{{#set: direction=left-to-right}}
* LIGAND-RXN:
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{{#set: nb gene associated=1}}
** [http://www.genome.jp/dbget-bin/www_bget?R01090 R01090]
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{{#set: nb pathway associated=1}}
* UNIPROT:
+
{{#set: reconstruction category=manual}}
** [http://www.uniprot.org/uniprot/Q9PIM6 Q9PIM6]
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P38891 P38891]
+
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
** [http://www.uniprot.org/uniprot/P47176 P47176]
+
{{#set: reconstruction source=reactions_add_147_emile_annot}}
** [http://www.uniprot.org/uniprot/O86505 O86505]
 
** [http://www.uniprot.org/uniprot/O14370 O14370]
 
** [http://www.uniprot.org/uniprot/O32954 O32954]
 
** [http://www.uniprot.org/uniprot/P0AB80 P0AB80]
 
{{#set: ec-number=ec-2.6.1.6|ec-2.6.1.42}}
 
{{#set: direction=reversible}}
 
{{#set: common-name=branched-chain amino acid aminotransferase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome|bthetaiotaomicron|ecoli|bifidobacterium|plantarum|faecalibacterium}}
 

Revision as of 07:18, 24 September 2020

Reaction RXN-18446

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5132, lupulone and humulone biosynthesis:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links