Difference between revisions of "RXN0-383"

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(Created page with "Category:reaction == Reaction RXN-1404 == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1] * direction: ** left-to-right * common-name: ** nitrilase == Rea...")
(Created page with "* navigation ** mainpage|mainpage-description ** Special:Ask|SMW-Ask ** workflow|workflow command history ** randompage-url|randompage ** Special:ListFiles|Files * Metabolic n...")
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[[Category:reaction]]
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* navigation
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== Reaction RXN-1404 ==
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** mainpage|mainpage-description
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* ec-number:
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** Special:Ask|SMW-Ask
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** [http://enzyme.expasy.org/EC/3.5.5.1 ec-3.5.5.1]
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** workflow|workflow command history
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* direction:
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** randompage-url|randompage
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** left-to-right
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** Special:ListFiles|Files
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* common-name:
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* Metabolic network components
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** nitrilase
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** Category:organism|organism
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== Reaction formula ==
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** Category:reaction|reaction
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* 1 [[INDOLEYL-CPD]][c] '''+''' 2 [[WATER]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[INDOLE_ACETATE_AUXIN]][c]
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** Category:gene|gene
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== Gene(s) associated with this reaction  ==
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** Category:pathway|pathway
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* Gene: [[FISUC_RS02085]]
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** Category:metabolite|metabolite
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** Category: [[annotation]]
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* Reconstruction categories
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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** annotation|annotation
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* Gene: [[FSU_RS03965]]
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** manual|manual
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** Category: [[annotation]]
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** orthology|orthology
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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* Reconstruction tools
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== Pathway(s)  ==
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** curation|curation
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* [[PWYQT-4476]], indole glucosinolate activation (herbivore attack):
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** orthofinder|orthofinder
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** '''1''' reactions found over '''13''' reactions in the full pathway
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** pathwaytools|pathwaytools
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* [[PWY-581]], indole-3-acetate biosynthesis II:
 
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** '''2''' reactions found over '''12''' reactions in the full pathway
 
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* [[PWY-5026]], indole-3-acetate biosynthesis V (bacteria and fungi):
 
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** '''1''' reactions found over '''1''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=45777 45777]
 
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R03093 R03093]
 
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{{#set: ec-number=ec-3.5.5.1}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: common-name=nitrilase}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=3}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Revision as of 07:49, 5 October 2020

  • navigation
    • mainpage|mainpage-description
    • Special:Ask|SMW-Ask
    • workflow|workflow command history
    • randompage-url|randompage
    • Special:ListFiles|Files
  • Metabolic network components
    • Category:organism|organism
    • Category:reaction|reaction
    • Category:gene|gene
    • Category:pathway|pathway
    • Category:metabolite|metabolite
  • Reconstruction categories
    • annotation|annotation
    • manual|manual
    • orthology|orthology
  • Reconstruction tools
    • curation|curation
    • orthofinder|orthofinder
    • pathwaytools|pathwaytools
Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=RXN0-383&oldid=38513"