Difference between revisions of "FISUC RS02460"

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(Created page with "Category:reaction == Reaction GLYCOGEN-BRANCH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18] * direction: ** left-to-right * common-name: ** 1,4...")
(Created page with "Category:reaction == Reaction PYRUVDEH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.m10 ec-1.2.1.m10] * direction: ** left-to-right == Reaction formula == * 1...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCOGEN-BRANCH-RXN ==
+
== Reaction PYRUVDEH-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
+
** [http://enzyme.expasy.org/EC/1.2.1.m10 ec-1.2.1.m10]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 1,4-alpha-glucan branching protein glgb
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[Glycogens]][c]
+
* 1 [[CO-A]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS15575]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS01770]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
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* [[PWY-5482]], pyruvate fermentation to acetate II:
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5537]], pyruvate fermentation to acetate V:
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6886]], 1-butanol autotrophic biosynthesis (engineered):
 +
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7384]], anaerobic energy metabolism (invertebrates, mitochondrial):
 +
** '''8''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7218]], photosynthetic 3-hydroxybutanoate biosynthesis (engineered):
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]], superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass:
 +
** '''3''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[add_reactions_sugar_if]]; tool: [[curation]]; comment: sugar reaction if
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* RHEA:
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* UNIPROT:
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28042 28042]
−
** [http://www.uniprot.org/uniprot/Q04446 Q04446]
+
* LIGAND-RXN:
−
** [http://www.uniprot.org/uniprot/P30539 P30539]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00209 R00209]
−
** [http://www.uniprot.org/uniprot/P30537 P30537]
+
{{#set: ec-number=ec-1.2.1.m10}}
−
** [http://www.uniprot.org/uniprot/P45177 P45177]
 
−
** [http://www.uniprot.org/uniprot/P16954 P16954]
 
−
** [http://www.uniprot.org/uniprot/Q41740 Q41740]
 
−
** [http://www.uniprot.org/uniprot/Q01401 Q01401]
 
−
** [http://www.uniprot.org/uniprot/P07762 P07762]
 
−
** [http://www.uniprot.org/uniprot/Q7M284 Q7M284]
 
−
** [http://www.uniprot.org/uniprot/P30538 P30538]
 
−
** [http://www.uniprot.org/uniprot/Q08809 Q08809]
 
−
** [http://www.uniprot.org/uniprot/Q59243 Q59243]
 
−
** [http://www.uniprot.org/uniprot/Q40733 Q40733]
 
−
** [http://www.uniprot.org/uniprot/Q59832 Q59832]
 
−
** [http://www.uniprot.org/uniprot/P30924 P30924]
 
−
** [http://www.uniprot.org/uniprot/P39118 P39118]
 
−
** [http://www.uniprot.org/uniprot/P52980 P52980]
 
−
** [http://www.uniprot.org/uniprot/P32775 P32775]
 
−
** [http://www.uniprot.org/uniprot/Q42526 Q42526]
 
−
** [http://www.uniprot.org/uniprot/Q42531 Q42531]
 
−
** [http://www.uniprot.org/uniprot/Q59833 Q59833]
 
−
** [http://www.uniprot.org/uniprot/O81387 O81387]
 
−
** [http://www.uniprot.org/uniprot/O24421 O24421]
 
−
** [http://www.uniprot.org/uniprot/Q08047 Q08047]
 
−
** [http://www.uniprot.org/uniprot/O24393 O24393]
 
−
** [http://www.uniprot.org/uniprot/Q41058 Q41058]
 
−
** [http://www.uniprot.org/uniprot/Q41059 Q41059]
 
−
** [http://www.uniprot.org/uniprot/P93691 P93691]
 
−
** [http://www.uniprot.org/uniprot/O04074 O04074]
 
−
** [http://www.uniprot.org/uniprot/O24397 O24397]
 
−
** [http://www.uniprot.org/uniprot/O49953 O49953]
 
−
** [http://www.uniprot.org/uniprot/O04864 O04864]
 
−
</div>
 
−
{{#set: ec-number=ec-2.4.1.18}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=6}}
−
{{#set: nb pathway associated=1}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=sugar reaction if}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=add_reactions_sugar_if}}
−
{{#set: reconstruction source=genome}}
 

Revision as of 07:52, 5 October 2020

Reaction PYRUVDEH-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5482, pyruvate fermentation to acetate II:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5537, pyruvate fermentation to acetate V:
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-6886, 1-butanol autotrophic biosynthesis (engineered):
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-7384, anaerobic energy metabolism (invertebrates, mitochondrial):
    • 8 reactions found over 10 reactions in the full pathway
  • PWY-7218, photosynthetic 3-hydroxybutanoate biosynthesis (engineered):
    • 5 reactions found over 4 reactions in the full pathway
  • GLYCOLYSIS-TCA-GLYOX-BYPASS, superpathway of glycolysis, pyruvate dehydrogenase, TCA, and glyoxylate bypass:
    • 3 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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