Difference between revisions of "FSU RS05440"

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(Created page with "Category:reaction == Reaction RXN-17133 == * ec-number: ** [http://enzyme.expasy.org/EC/3.9.1.3 ec-3.9.1.3] * direction: ** left-to-right == Reaction formula == * 1 Prot...")
(Created page with "Category:reaction == Reaction UROGENIIISYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75] * direction: ** left-to-right == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-17133 ==
+
== Reaction UROGENIIISYN-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/3.9.1.3 ec-3.9.1.3]
+
** [http://enzyme.expasy.org/EC/4.2.1.75 ec-4.2.1.75]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[Protein-phospho-L-histidines]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[Protein-Histidines]][c]
+
* 1 [[HYDROXYMETHYLBILANE]][c] '''=>''' 1 [[UROPORPHYRINOGEN-III]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* Gene: [[FSU_RS16120]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS09920]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS13625]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS07910]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS09420]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS09915]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
* Gene: [[FSU_RS12550]]
 
** Category: [[manual]]
 
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5188]], tetrapyrrole biosynthesis I (from glutamate):
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5189]], tetrapyrrole biosynthesis II (from glycine):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=47961 47961]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18965 18965]
{{#set: ec-number=ec-3.9.1.3}}
+
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R03165 R03165]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P10746 P10746]
 +
** [http://www.uniprot.org/uniprot/P51163 P51163]
 +
** [http://www.uniprot.org/uniprot/P21248 P21248]
 +
** [http://www.uniprot.org/uniprot/Q58401 Q58401]
 +
** [http://www.uniprot.org/uniprot/P09126 P09126]
 +
** [http://www.uniprot.org/uniprot/Q59294 Q59294]
 +
{{#set: ec-number=ec-4.2.1.75}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: nb gene associated=7}}
+
{{#set: nb gene associated=0}}
{{#set: nb pathway associated=0}}
+
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=added for gap-filling}}
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=reactions_add_gp}}

Revision as of 07:54, 5 October 2020

Reaction UROGENIIISYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5188, tetrapyrrole biosynthesis I (from glutamate):
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-5189, tetrapyrrole biosynthesis II (from glycine):
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links