Difference between revisions of "FSU RS14885"

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(Created page with "Category:reaction == Reaction PSERTRANSAMPYR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52] * direction: ** reversible * common-name: ** 3-phosp...")
(Created page with "Category:reaction == Reaction Export_ACET == * direction: ** left-to-right == Reaction formula == * 1.0 ACET[c] '''=>''' 1.0 ACET[C-BOUNDARY] == Gene(s) associated...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction PSERTRANSAMPYR-RXN ==
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== Reaction Export_ACET ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/2.6.1.52 ec-2.6.1.52]
 
 
* direction:
 
* direction:
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** reversible
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** left-to-right
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* common-name:
 
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** 3-phosphoserine/phosphohydroxythreonine transaminase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c]
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* 1.0 [[ACET]][c] '''=>''' 1.0 [[ACET]][C-BOUNDARY]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS04780]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FISUC_RS02890]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I:
 
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** '''4''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[reactions_export]]; tool: [[curation]]; comment: avoid storage
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
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* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16576 16576]
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{{#set: nb gene associated=0}}
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* LIGAND-RXN:
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{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085]
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{{#set: reconstruction category=manual}}
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{{#set: ec-number=ec-2.6.1.52}}
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{{#set: reconstruction tool=curation}}
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{{#set: direction=reversible}}
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{{#set: reconstruction comment=avoid storage}}
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{{#set: common-name=3-phosphoserine/phosphohydroxythreonine transaminase}}
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{{#set: reconstruction source=reactions_export}}
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=1}}
 
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{{#set: reconstruction category=annotation|orthology}}
 
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{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=ecoli|faecalibacterium|bthetaiotaomicron|genome|bifidobacterium}}
 

Revision as of 07:56, 5 October 2020

Reaction Export_ACET

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

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