Difference between revisions of "FISUC RS12770"
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(Created page with "Category:reaction == Reaction THYM-PHOSPH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.2 ec-2.4.2.2] ** [http://enzyme.expasy.org/EC/2.4.2.4 ec-2.4.2.4] * dir...") |
(Created page with "Category:reaction == Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23] * direction: ** reversible == R...") |
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| Line 1: | Line 1: | ||
[[Category:reaction]] | [[Category:reaction]] | ||
| − | == Reaction | + | == Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN == |
* ec-number: | * ec-number: | ||
| − | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.6.1.23 ec-2.6.1.23] |
| − | |||
* direction: | * direction: | ||
** reversible | ** reversible | ||
== Reaction formula == | == Reaction formula == | ||
| − | * 1 [[ | + | * 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[L-ERYTHRO-4-HYDROXY-GLUTAMATE]][c] '''<=>''' 1 [[CPD-15015]][c] '''+''' 1 [[GLT]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
| + | * Gene: [[FSU_RS14145]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[FSU_RS02470]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
| + | * Gene: [[FSU_RS13690]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
| − | * [[PWY | + | * [[HYDROXYPRODEG-PWY]], trans-4-hydroxy-L-proline degradation I: |
| − | ** ''' | + | ** '''3''' reactions found over '''5''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
| − | * category: [[ | + | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a |
| + | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
| + | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
| − | |||
| − | |||
* LIGAND-RXN: | * LIGAND-RXN: | ||
| − | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R03266 R03266] |
| − | + | {{#set: ec-number=ec-2.6.1.23}} | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | {{#set: ec-number=ec-2. | ||
{{#set: direction=reversible}} | {{#set: direction=reversible}} | ||
| − | {{#set: nb gene associated= | + | {{#set: nb gene associated=3}} |
{{#set: nb pathway associated=1}} | {{#set: nb pathway associated=1}} | ||
| − | {{#set: reconstruction category= | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=orthofinder}} |
| − | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=plantarum|faecalibacterium|bthetaiotaomicron}} |
Revision as of 07:57, 5 October 2020
Contents
Reaction 4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN
- ec-number:
- direction:
- reversible
Reaction formula
- 1 2-KETOGLUTARATE[c] + 1 L-ERYTHRO-4-HYDROXY-GLUTAMATE[c] <=> 1 CPD-15015[c] + 1 GLT[c]
Gene(s) associated with this reaction
- Gene: FSU_RS14145
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: FSU_RS02470
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
- Gene: FSU_RS13690
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: orthology
Pathway(s)
- HYDROXYPRODEG-PWY, trans-4-hydroxy-L-proline degradation I:
- 3 reactions found over 5 reactions in the full pathway
Reconstruction information
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
External links
- LIGAND-RXN:
