Difference between revisions of "FISUC RS07845"

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(Created page with "Category:reaction == Reaction OXALODECARB-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.112 ec-4.1.1.112] * direction: ** left-to-right == Reaction formula ==...")
(Created page with "Category:reaction == Reaction ARGSUCCINLYA-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1] * direction: ** reversible * common-name: ** argininosuc...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction OXALODECARB-RXN ==
+
== Reaction ARGSUCCINLYA-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.112 ec-4.1.1.112]
+
** [http://enzyme.expasy.org/EC/4.3.2.1 ec-4.3.2.1]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** argininosuccinate lyase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[OXALACETIC_ACID]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[L-ARGININO-SUCCINATE]][c] '''<=>''' 1 [[ARG]][c] '''+''' 1 [[FUM]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS09880]]
+
* Gene: [[FSU_RS01345]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FSU_RS09935]]
+
* Gene: [[FISUC_RS15155]]
−
** Category: [[orthology]]
+
** Category: [[annotation]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[P184-PWY]], protocatechuate degradation I (meta-cleavage pathway):
+
* [[ARGSYNBSUB-PWY]], L-arginine biosynthesis II (acetyl cycle):
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6339]], syringate degradation:
+
* [[PWY-4984]], urea cycle:
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[METHYLGALLATE-DEGRADATION-PWY]], methylgallate degradation:
+
* [[PWY-4983]], nitric oxide biosynthesis II (mammals):
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5154]], L-arginine biosynthesis III (via N-acetyl-L-citrulline):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[ARGSYN-PWY]], L-arginine biosynthesis I (via L-ornithine):
 +
** '''5''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7400]], L-arginine biosynthesis IV (archaebacteria):
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15642 15642]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24023 24023]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00217 R00217]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01086 R01086]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13187 P13187]
+
** [http://www.uniprot.org/uniprot/P50987 P50987]
−
** [http://www.uniprot.org/uniprot/P13155 P13155]
+
** [http://www.uniprot.org/uniprot/Q46104 Q46104]
−
** [http://www.uniprot.org/uniprot/P13156 P13156]
+
** [http://www.uniprot.org/uniprot/P11447 P11447]
−
** [http://www.uniprot.org/uniprot/Q58628 Q58628]
+
** [http://www.uniprot.org/uniprot/Q9JVG7 Q9JVG7]
−
{{#set: ec-number=ec-4.1.1.112}}
+
** [http://www.uniprot.org/uniprot/Q9CJ76 Q9CJ76]
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P44314 P44314]
 +
** [http://www.uniprot.org/uniprot/Q58201 Q58201]
 +
** [http://www.uniprot.org/uniprot/P33110 P33110]
 +
** [http://www.uniprot.org/uniprot/Q01592 Q01592]
 +
** [http://www.uniprot.org/uniprot/P40369 P40369]
 +
** [http://www.uniprot.org/uniprot/P50988 P50988]
 +
** [http://www.uniprot.org/uniprot/P73257 P73257]
 +
** [http://www.uniprot.org/uniprot/P50514 P50514]
 +
** [http://www.uniprot.org/uniprot/P04076 P04076]
 +
** [http://www.uniprot.org/uniprot/P04424 P04424]
 +
** [http://www.uniprot.org/uniprot/P20673 P20673]
 +
</div>
 +
{{#set: ec-number=ec-4.3.2.1}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=argininosuccinate lyase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=6}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bthetaiotaomicron|ecoli|faecalibacterium}}
+
{{#set: reconstruction source=genome}}

Revision as of 07:57, 5 October 2020

Reaction ARGSUCCINLYA-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • argininosuccinate lyase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • ARGSYNBSUB-PWY, L-arginine biosynthesis II (acetyl cycle):
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-4984, urea cycle:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-4983, nitric oxide biosynthesis II (mammals):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5154, L-arginine biosynthesis III (via N-acetyl-L-citrulline):
    • 7 reactions found over 9 reactions in the full pathway
  • ARGSYN-PWY, L-arginine biosynthesis I (via L-ornithine):
    • 5 reactions found over 4 reactions in the full pathway
  • PWY-7400, L-arginine biosynthesis IV (archaebacteria):
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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