Difference between revisions of "FSU RS06125"

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(Created page with "Category:reaction == Reaction RXN-15733 == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3] * direction: ** left-to-right * common-name: ** 2-amino-4-hydro...")
 
(Created page with "Category:reaction == Reaction R10-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43] * direction: ** reversible == Reaction formula == * 1 [[CPD-26]...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-15733 ==
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== Reaction R10-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.7.6.3 ec-2.7.6.3]
+
** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43]
 
* direction:
 
* direction:
** left-to-right
+
** reversible
* common-name:
 
** 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CPD-16953]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-16954]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD-26]][c] '''<=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[RIBULOSE-5P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS14195]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
* Gene: [[FISUC_RS12225]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6148]], tetrahydromethanopterin biosynthesis:
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* [[PWY-7796]], pentose phosphate pathway (oxidative branch) II:
** '''2''' reactions found over '''14''' reactions in the full pathway
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** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[RUMP-PWY]], formaldehyde oxidation I:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
 
== External links  ==
 
== External links  ==
{{#set: ec-number=ec-2.7.6.3}}
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* RHEA:
{{#set: direction=left-to-right}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25204 25204]
{{#set: common-name=2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase}}
+
* LIGAND-RXN:
{{#set: nb gene associated=2}}
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** [http://www.genome.jp/dbget-bin/www_bget?R05338 R05338]
{{#set: nb pathway associated=1}}
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{{#set: ec-number=ec-4.1.2.43}}
{{#set: reconstruction category=annotation}}
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{{#set: direction=reversible}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: nb gene associated=0}}
{{#set: reconstruction comment=n.a}}
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{{#set: nb pathway associated=3}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=added to improve flux in sugars}}
 +
{{#set: reconstruction source=reactions_add_ibrahim_26082020}}

Revision as of 07:57, 5 October 2020

Reaction R10-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7796, pentose phosphate pathway (oxidative branch) II:
    • 2 reactions found over 2 reactions in the full pathway
  • RUMP-PWY, formaldehyde oxidation I:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-1861, formaldehyde assimilation II (assimilatory RuMP Cycle):
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links