Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction TEICHOICSYN2-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.187 ec-2.4.1.187] * direction: ** left-to-right == Reaction formula ==...")
(Created page with "Category:reaction == Reaction RXN-18693 == * ec-number: ** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13] * direction: ** left-to-right * common-name: ** trna 2-thiour...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TEICHOICSYN2-RXN ==
+
== Reaction RXN-18693 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.187 ec-2.4.1.187]
+
** [http://enzyme.expasy.org/EC/2.8.1.13 ec-2.8.1.13]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** trna 2-thiouridine(34) synthase mnma
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ACETYL-D-GLUCOSAMINYLDIPHOSPHO-UNDECAPRE]][c] '''+''' 1 [[UDP-MANNAC]][c] '''=>''' 1 [[ACETYL-ETCETERA-GLUCOSAMINYLDIPHOSPHOUND]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[UDP]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[SAMP-C-Terminal-thiol]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[tRNA-uridine34]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[SAMP-C-Terminal-Glycine]][c] '''+''' 1 [[tRNA-2-thiouridine34]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS06700]]
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* Gene: [[FISUC_RS04330]]
−
** Category: [[manual]]
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** Category: [[annotation]]
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS05355]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS07250]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS06220]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7819]], poly(3-O-β-D-glucopyranosyl-N-acetylgalactosamine 1-phosphate) wall teichoic acid biosynthesis:
+
* [[PWY-7887]], protein SAMPylation and SAMP-mediated thiolation:
−
** '''4''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[TEICHOICACID-PWY]], poly(glycerol phosphate) wall teichoic acid biosynthesis:
 
−
** '''4''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-7815]], poly(ribitol phosphate) wall teichoic acid biosynthesis I (B. subtilis):
 
−
** '''4''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-7816]], poly(ribitol phosphate) wall teichoic acid biosynthesis II (S. aureus):
 
−
** '''4''' reactions found over '''17''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: ec-number=ec-2.8.1.13}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16054 16054]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R05566 R05566]
 
−
{{#set: ec-number=ec-2.4.1.187}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: common-name=trna 2-thiouridine(34) synthase mnma}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 07:07, 9 October 2020

Reaction RXN-18693

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • trna 2-thiouridine(34) synthase mnma

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7887, protein SAMPylation and SAMP-mediated thiolation:
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS15510&oldid=44498"