Difference between revisions of "FSU RS14775"

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(Created page with "Category:reaction == Reaction GLYCERATE-DEHYDROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.29 ec-1.1.1.29] * direction: ** reversible == Reaction form...")
(Created page with "Category:reaction == Reaction 3.1.21.3-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.21.3 ec-3.1.21.3] * direction: ** left-to-right == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GLYCERATE-DEHYDROGENASE-RXN ==
+
== Reaction 3.1.21.3-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.1.1.29 ec-1.1.1.29]
+
** [http://enzyme.expasy.org/EC/3.1.21.3 ec-3.1.21.3]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYCERATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[NADH]][c] '''+''' 1 [[OH-PYR]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[DNA-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[Double-Stranded-DNA-with-terminal-PO4s]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS15335]]
+
* Gene: [[FSU_RS08605]]
−
** Category: [[orthology]]
+
** Category: [[manual]]
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
+
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-181]], photorespiration:
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17907 17907]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01388 R01388]
 
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P13443 P13443]
+
** [http://www.uniprot.org/uniprot/Q9PMC0 Q9PMC0]
−
** [http://www.uniprot.org/uniprot/Q9JWP1 Q9JWP1]
+
** [http://www.uniprot.org/uniprot/Q9JV16 Q9JV16]
−
** [http://www.uniprot.org/uniprot/Q42708 Q42708]
+
** [http://www.uniprot.org/uniprot/O05052 O05052]
−
** [http://www.uniprot.org/uniprot/Q42709 Q42709]
+
** [http://www.uniprot.org/uniprot/Q47280 Q47280]
−
{{#set: ec-number=ec-1.1.1.29}}
+
** [http://www.uniprot.org/uniprot/P95512 P95512]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/P95511 P95511]
 +
** [http://www.uniprot.org/uniprot/P19705 P19705]
 +
** [http://www.uniprot.org/uniprot/P08956 P08956]
 +
** [http://www.uniprot.org/uniprot/P05719 P05719]
 +
** [http://www.uniprot.org/uniprot/P10484 P10484]
 +
** [http://www.uniprot.org/uniprot/P10485 P10485]
 +
** [http://www.uniprot.org/uniprot/P10486 P10486]
 +
** [http://www.uniprot.org/uniprot/Q46044 Q46044]
 +
** [http://www.uniprot.org/uniprot/O52272 O52272]
 +
** [http://www.uniprot.org/uniprot/O52273 O52273]
 +
** [http://www.uniprot.org/uniprot/O52274 O52274]
 +
** [http://www.uniprot.org/uniprot/O54430 O54430]
 +
** [http://www.uniprot.org/uniprot/O54431 O54431]
 +
** [http://www.uniprot.org/uniprot/O54432 O54432]
 +
** [http://www.uniprot.org/uniprot/Q9RNW2 Q9RNW2]
 +
** [http://www.uniprot.org/uniprot/Q9RNW1 Q9RNW1]
 +
** [http://www.uniprot.org/uniprot/Q9RNW0 Q9RNW0]
 +
</div>
 +
{{#set: ec-number=ec-3.1.21.3}}
 +
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=orthofinder}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
−
{{#set: reconstruction source=ecoli}}
+
{{#set: reconstruction source=reactions_add_147_emile_annot}}

Revision as of 07:09, 9 October 2020

Reaction 3.1.21.3-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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