Difference between revisions of "FSU RS15260"

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(Created page with "Category:reaction == Reaction RXN-15878 == * ec-number: ** [http://enzyme.expasy.org/EC/1.17.7.3 ec-1.17.7.3] * direction: ** left-to-right == Reaction formula == * 1 2C...")
(Created page with "Category:reaction == Reaction 3.1.26.4-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.26.4 ec-3.1.26.4] * direction: ** left-to-right * common-name: ** ribonuclea...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-15878 ==
+
== Reaction 3.1.26.4-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.17.7.3 ec-1.17.7.3]
+
** [http://enzyme.expasy.org/EC/3.1.26.4 ec-3.1.26.4]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** ribonuclease hii
 +
** ribonuclease h
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[2C-METH-D-ERYTHRITOL-CYCLODIPHOSPHATE]][c] '''+''' 1 [[Reduced-flavodoxins]][c] '''=>''' 1 [[HYDROXY-METHYL-BUTENYL-DIP]][c] '''+''' 1 [[Oxidized-flavodoxins]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
+
* 1 [[RNA-DNA-hybrids]][c] '''+''' n [[WATER]][c] '''=>''' 1 [[DNA-Holder]][c] '''+''' n [[Nucleoside-Monophosphates]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS01150]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS15575]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS13600]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS14960]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_ibrahim_23092020]]; tool: [[curation]]; comment: to improve flux
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=43606 43606]
+
* UNIPROT:
−
{{#set: ec-number=ec-1.17.7.3}}
+
** [http://www.uniprot.org/uniprot/P52975 P52975]
 +
** [http://www.uniprot.org/uniprot/Q9CDG3 Q9CDG3]
 +
** [http://www.uniprot.org/uniprot/Q9PM39 Q9PM39]
 +
** [http://www.uniprot.org/uniprot/Q9JX40 Q9JX40]
 +
** [http://www.uniprot.org/uniprot/P43807 P43807]
 +
** [http://www.uniprot.org/uniprot/P43808 P43808]
 +
** [http://www.uniprot.org/uniprot/Q9PJA1 Q9PJA1]
 +
** [http://www.uniprot.org/uniprot/Q9CG17 Q9CG17]
 +
** [http://www.uniprot.org/uniprot/Q9JTD9 Q9JTD9]
 +
** [http://www.uniprot.org/uniprot/Q57599 Q57599]
 +
** [http://www.uniprot.org/uniprot/O44114 O44114]
 +
** [http://www.uniprot.org/uniprot/P0A7Y4 P0A7Y4]
 +
** [http://www.uniprot.org/uniprot/P10442 P10442]
 +
** [http://www.uniprot.org/uniprot/P13319 P13319]
 +
** [http://www.uniprot.org/uniprot/Q7LYY8 Q7LYY8]
 +
** [http://www.uniprot.org/uniprot/P0A2B9 P0A2B9]
 +
** [http://www.uniprot.org/uniprot/Q04740 Q04740]
 +
** [http://www.uniprot.org/uniprot/Q49050 Q49050]
 +
** [http://www.uniprot.org/uniprot/O69014 O69014]
 +
** [http://www.uniprot.org/uniprot/Q54222 Q54222]
 +
</div>
 +
{{#set: ec-number=ec-3.1.26.4}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=ribonuclease h|ribonuclease hii}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb gene associated=4}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb pathway associated=0}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction comment=to improve flux}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction source=reactions_add_ibrahim_23092020}}
+
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 07:11, 9 October 2020

Reaction 3.1.26.4-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • ribonuclease hii
    • ribonuclease h

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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