Difference between revisions of "FSU RS13360"

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(Created page with "Category:reaction == Reaction RXN-10917 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 CPD-...")
(Created page with "Category:reaction == Reaction COBINPGUANYLYLTRANS-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62] * direction: ** left-to-right == Reaction formu...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-10917 ==
+
== Reaction COBINPGUANYLYLTRANS-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/2.7.7.62 ec-2.7.7.62]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-11876]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[VANILLYL_MANDELATE]][c]
+
* 1 [[ADENOSYLCOBINAMIDE-P]][c] '''+''' 1 [[GTP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ADENOSYLCOBINAMIDE-GDP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01755]]
 
−
** Category: [[manual]]
 
−
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-6342]], noradrenaline and adrenaline degradation:
+
* [[PWY-7972]], adenosylcobinamideGDP salvage from cobinamide II:
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** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-6269]], superpathway of adenosylcobalamin salvage from cobinamide II:
 +
** '''8''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7962]], adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
 +
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7971]], adenosylcobinamide-GDP salvage from cobinamide I:
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[COBALSYN-PWY]], superpathway of adenosylcobalamin salvage from cobinamide I:
 +
** '''7''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach adenosylcobinamide-gdp
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22712 22712]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04891 R04891]
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** [http://www.genome.jp/dbget-bin/www_bget?R05222 R05222]
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{{#set: ec-number=ec-1.2.1.3}}
+
{{#set: ec-number=ec-2.7.7.62}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=1}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=5}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction category=manual}}
 
{{#set: reconstruction tool=curation}}
 
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=added to reach adenosylcobinamide-gdp}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}

Revision as of 07:12, 9 October 2020

Reaction COBINPGUANYLYLTRANS-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7972, adenosylcobinamideGDP salvage from cobinamide II:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-6269, superpathway of adenosylcobalamin salvage from cobinamide II:
    • 8 reactions found over 6 reactions in the full pathway
  • PWY-7962, adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7971, adenosylcobinamide-GDP salvage from cobinamide I:
    • 5 reactions found over 5 reactions in the full pathway
  • COBALSYN-PWY, superpathway of adenosylcobalamin salvage from cobinamide I:
    • 7 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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