Difference between revisions of "FORMALDEHYDE"
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(Created page with "Category:gene == Gene FSU_RS01425 == * common-name: ** hemb * transcription-direction: ** negative * centisome-position: ** 8.760802 * left-end-position: ** 336678 * r...") |
(Created page with "Category:gene == Gene FSU_RS03780 == * common-name: ** pgk * transcription-direction: ** negative * centisome-position: ** 22.769556 * left-end-position: ** 875035 * r...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene FSU_RS03780 == |
* common-name: | * common-name: | ||
− | ** | + | ** pgk |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 22.769556 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 875035 |
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 876291 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[ | + | * [[fibrobacter_final_03112020]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[PHOSGLYPHOS-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
+ | *** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | *** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
+ | *** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
− | ** ''' | + | * [[P185-PWY]] |
− | * [[PWY- | + | ** '''10''' reactions found over '''12''' reactions in the full pathway |
− | ** '''6''' reactions found over ''' | + | * [[PWY-1042]] |
− | {{#set: common-name= | + | ** '''9''' reactions found over '''10''' reactions in the full pathway |
+ | * [[SUCSYN-PWY]] | ||
+ | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[ANAGLYCOLYSIS-PWY]] | ||
+ | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[CALVIN-PWY]] | ||
+ | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[GLYCOLYSIS]] | ||
+ | ** '''12''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[PWY-6901]] | ||
+ | ** '''10''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY66-399]] | ||
+ | ** '''12''' reactions found over '''12''' reactions in the full pathway | ||
+ | * [[GLUCONEO-PWY]] | ||
+ | ** '''13''' reactions found over '''13''' reactions in the full pathway | ||
+ | * [[PWY-5484]] | ||
+ | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-7003]] | ||
+ | ** '''7''' reactions found over '''6''' reactions in the full pathway | ||
+ | * [[PWY-6886]] | ||
+ | ** '''6''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''14''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''17''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-8004]] | ||
+ | ** '''8''' reactions found over '''7''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: common-name=pgk}} | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
− | {{#set: centisome-position= | + | {{#set: centisome-position=22.769556 }} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=875035}} |
− | {{#set: right-end-position= | + | {{#set: right-end-position=876291}} |
− | {{#set: organism associated= | + | {{#set: organism associated=fibrobacter_final_03112020}} |
{{#set: nb reaction associated=1}} | {{#set: nb reaction associated=1}} | ||
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=15}} |
Revision as of 17:38, 3 November 2020
Contents
Gene FSU_RS03780
- common-name:
- pgk
- transcription-direction:
- negative
- centisome-position:
- 22.769556
- left-end-position:
- 875035
- right-end-position:
- 876291
Organism(s) associated with this gene
Reaction(s) associated
- PHOSGLYPHOS-RXN
- Category: annotation
- source: genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: bthetaiotaomicron; tool: orthofinder; comment: n.a
- source: bifidobacterium; tool: orthofinder; comment: n.a
- source: faecalibacterium; tool: orthofinder; comment: n.a
- source: ecoli; tool: orthofinder; comment: n.a
- source: plantarum; tool: orthofinder; comment: n.a
- Category: annotation
Pathway(s) associated
- P185-PWY
- 10 reactions found over 12 reactions in the full pathway
- PWY-1042
- 9 reactions found over 10 reactions in the full pathway
- SUCSYN-PWY
- 6 reactions found over 7 reactions in the full pathway
- ANAGLYCOLYSIS-PWY
- 11 reactions found over 11 reactions in the full pathway
- CALVIN-PWY
- 13 reactions found over 13 reactions in the full pathway
- GLYCOLYSIS
- 12 reactions found over 12 reactions in the full pathway
- PWY-6901
- 10 reactions found over 8 reactions in the full pathway
- PWY66-399
- 12 reactions found over 12 reactions in the full pathway
- GLUCONEO-PWY
- 13 reactions found over 13 reactions in the full pathway
- PWY-5484
- 11 reactions found over 11 reactions in the full pathway
- PWY-7003
- 7 reactions found over 6 reactions in the full pathway
- PWY-6886
- 6 reactions found over 5 reactions in the full pathway
- P124-PWY
- 14 reactions found over 15 reactions in the full pathway
- P122-PWY
- 17 reactions found over 18 reactions in the full pathway
- PWY-8004
- 8 reactions found over 7 reactions in the full pathway