Difference between revisions of "FISUC RS10855"

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(Created page with "Category:reaction == Reaction RXN-14371 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18] * direction: ** left-to-right * common-name: ** 1,4-alpha-glu...")
(Created page with "Category:reaction == Reaction DTDPDEHYDRHAMEPIM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13] * direction: ** left-to-right * common-name: ** d...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-14371 ==
+
== Reaction DTDPDEHYDRHAMEPIM-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.1.18 ec-2.4.1.18]
+
** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** 1,4-alpha-glucan branching protein glgb
+
** dtdp-4-dehydrorhamnose 3,5-epimerase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[1-4-alpha-D-Glucan]][c] '''=>''' 1 [[Alpha-6-alpha-14-glucans]][c]
+
* 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01770]]
+
* Gene: [[FISUC_RS03895]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS15575]]
+
* Gene: [[FSU_RS05790]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-622]], starch biosynthesis:
+
* [[PWY-7301]], dTDP-4-O-demethyl-β-L-noviose biosynthesis:
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis:
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis:
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.4.1.18}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1]
 +
** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7]
 +
** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9]
 +
** [http://www.uniprot.org/uniprot/P37745 P37745]
 +
** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5]
 +
** [http://www.uniprot.org/uniprot/P37763 P37763]
 +
** [http://www.uniprot.org/uniprot/Q46770 Q46770]
 +
** [http://www.uniprot.org/uniprot/P29783 P29783]
 +
{{#set: ec-number=ec-5.1.3.13}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1,4-alpha-glucan branching protein glgb}}
+
{{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=3}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 17:49, 3 November 2020

Reaction DTDPDEHYDRHAMEPIM-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • dtdp-4-dehydrorhamnose 3,5-epimerase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7301, dTDP-4-O-demethyl-β-L-noviose biosynthesis:
    • 3 reactions found over 5 reactions in the full pathway
  • PWY-7814, dTDP-L-daunosamine biosynthesis:
    • 3 reactions found over 6 reactions in the full pathway
  • DTDPRHAMSYN-PWY, dTDP-L-rhamnose biosynthesis:
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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