Difference between revisions of "FISUC RS03515"

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(Created page with "Category:reaction == Reaction RXN-16117 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15] * direction: ** left-to-right * common-name: ** glycerol-3-ph...")
(Created page with "Category:reaction == Reaction PROTOHEMEFERROCHELAT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.99.1.1 ec-4.99.1.1] * direction: ** reversible == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-16117 ==
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== Reaction PROTOHEMEFERROCHELAT-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.15 ec-2.3.1.15]
+
** [http://enzyme.expasy.org/EC/4.99.1.1 ec-4.99.1.1]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** glycerol-3-phosphate 1-o-acyltransferase plsy
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[CPD-17370]][c] '''+''' 1 [[GLYCEROL-3P]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17372]][c]
+
* 1 [[PROTOHEME]][c] '''+''' 2 [[PROTON]][c] '''<=>''' 1 [[FE+2]][c] '''+''' 1 [[PROTOPORPHYRIN_IX]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS13260]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS11295]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6453]], stigma estolide biosynthesis:
+
* [[HEME-BIOSYNTHESIS-II]], heme b biosynthesis I (aerobic):
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[HEMESYN2-PWY]], heme b biosynthesis II (anaerobic):
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-1415]], superpathway of heme b biosynthesis from uroporphyrinogen-III:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_ibrahim_glycogen_03112020]]; tool: [[curation]]; comment: to improve flux in glycogen
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.15}}
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: direction=left-to-right}}
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* RHEA:
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{{#set: common-name=glycerol-3-phosphate 1-o-acyltransferase plsy}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22584 22584]
−
{{#set: nb gene associated=2}}
+
* LIGAND-RXN:
−
{{#set: nb pathway associated=1}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00310 R00310]
−
{{#set: reconstruction category=annotation}}
+
* UNIPROT:
−
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/P22830 P22830]
−
{{#set: reconstruction comment=n.a}}
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** [http://www.uniprot.org/uniprot/P22315 P22315]
−
{{#set: reconstruction source=genome}}
+
** [http://www.uniprot.org/uniprot/P28602 P28602]
 +
** [http://www.uniprot.org/uniprot/Q05338 Q05338]
 +
** [http://www.uniprot.org/uniprot/P42043 P42043]
 +
** [http://www.uniprot.org/uniprot/P23871 P23871]
 +
** [http://www.uniprot.org/uniprot/P32396 P32396]
 +
** [http://www.uniprot.org/uniprot/Q9CFB4 Q9CFB4]
 +
** [http://www.uniprot.org/uniprot/P56107 P56107]
 +
** [http://www.uniprot.org/uniprot/O67083 O67083]
 +
** [http://www.uniprot.org/uniprot/Q9PI08 Q9PI08]
 +
** [http://www.uniprot.org/uniprot/Q9JVA5 Q9JVA5]
 +
** [http://www.uniprot.org/uniprot/P22600 P22600]
 +
** [http://www.uniprot.org/uniprot/P43868 P43868]
 +
** [http://www.uniprot.org/uniprot/P16622 P16622]
 +
** [http://www.uniprot.org/uniprot/Q59735 Q59735]
 +
** [http://www.uniprot.org/uniprot/P43413 P43413]
 +
** [http://www.uniprot.org/uniprot/P54225 P54225]
 +
** [http://www.uniprot.org/uniprot/P42045 P42045]
 +
** [http://www.uniprot.org/uniprot/O64391 O64391]
 +
** [http://www.uniprot.org/uniprot/P42044 P42044]
 +
</div>
 +
{{#set: ec-number=ec-4.99.1.1}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=0}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=to improve flux in glycogen}}
 +
{{#set: reconstruction source=reactions_add_ibrahim_glycogen_03112020}}

Revision as of 17:50, 3 November 2020

Reaction PROTOHEMEFERROCHELAT-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HEME-BIOSYNTHESIS-II, heme b biosynthesis I (aerobic):
    • 2 reactions found over 4 reactions in the full pathway
  • HEMESYN2-PWY, heme b biosynthesis II (anaerobic):
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1415, superpathway of heme b biosynthesis from uroporphyrinogen-III:
    • 3 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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