Difference between revisions of "FSU RS00290"

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(Created page with "Category:reaction == Reaction RXN-19295 == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.21 ec-2.4.2.21] * direction: ** left-to-right == Reaction formula == * 1 AD...")
(Created page with "Category:reaction == Reaction RXN-9655 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86] ** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85] ** [http...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-19295 ==
+
== Reaction RXN-9655 ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.21 ec-2.4.2.21]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/4.2.1.59 ec-4.2.1.59]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** 3-hydroxyacyl-acp dehydratase fabz
 +
* synonymous:
 +
** β-hydroxyacyl-acyl carrier protein dehydratase
 +
** β-hydroxydecanoate dehydrase
 +
** β-hydroxydecanoyl thiol ester dehydrase
 +
** β-hydroxyacyl-acp dehydrase
 +
** d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
 +
** (3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
 +
** hddase
 +
** faba
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ADENINE]][c] '''+''' 1 [[NICOTINATE_NUCLEOTIDE]][c] '''=>''' 1 [[CPD-20826]][c] '''+''' 1 [[NIACINE]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[Beta-hydroxydecanoyl-ACPs]][c] '''=>''' 1 [[Trans-D2-decenoyl-ACPs]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FISUC_RS14115]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS00310]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7964]], adeninyl adenosylcobamide biosynthesis from adenosylcobinamide-GDP:
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''22''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY0-862]], (5Z)-dodecenoate biosynthesis I:
 +
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi):
 +
** '''20''' reactions found over '''31''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.4.2.21}}
+
{{#set: ec-number=ec-4.2.1.59|ec-2.3.1.85|ec-2.3.1.86}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=3-hydroxyacyl-acp dehydratase fabz}}
−
{{#set: nb pathway associated=1}}
+
{{#set: synonymous=β-hydroxyacyl-acyl carrier protein dehydratase|faba|β-hydroxydecanoyl thiol ester dehydrase|(3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase|d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase|β-hydroxydecanoate dehydrase|hddase|β-hydroxyacyl-acp dehydrase}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 17:53, 3 November 2020

Reaction RXN-9655

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 3-hydroxyacyl-acp dehydratase fabz
  • synonymous:
    • β-hydroxyacyl-acyl carrier protein dehydratase
    • β-hydroxydecanoate dehydrase
    • β-hydroxydecanoyl thiol ester dehydrase
    • β-hydroxyacyl-acp dehydrase
    • d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase
    • (3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase
    • hddase
    • faba

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5971, palmitate biosynthesis II (bacteria and plants):
    • 22 reactions found over 31 reactions in the full pathway
  • PWY0-862, (5Z)-dodecenoate biosynthesis I:
    • 4 reactions found over 6 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi):
    • 20 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • Property "Synonymous" (as page type) with input value "(3r)-3-hydroxydecanoyl-[acyl-carrier-protein] hydro-lyase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Synonymous" (as page type) with input value "d-3-hydroxydecanoyl-[acyl-carrier protein] dehydratase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.




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