Difference between revisions of "FISUC RS09230"

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(Created page with "Category:reaction == Reaction ORNDECARBOX-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction RXN-9532 == * common-name: ** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase ** 3-oxoacyl-[acyl-carrier-protein] reductase ** 3-oxoacyl-ac...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ORNDECARBOX-RXN ==
+
== Reaction RXN-9532 ==
 +
* common-name:
 +
** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
 +
** 3-oxoacyl-[acyl-carrier-protein] reductase
 +
** 3-oxoacyl-acp reductase fabg
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/4.1.1.17 ec-4.1.1.17]
+
** [http://enzyme.expasy.org/EC/2.3.1.86 ec-2.3.1.86]
 +
** [http://enzyme.expasy.org/EC/2.3.1.85 ec-2.3.1.85]
 +
** [http://enzyme.expasy.org/EC/1.1.1.100 ec-1.1.1.100]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[L-ORNITHINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PUTRESCINE]][c]
+
* 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxydodecanoyl-ACPs]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS12065]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS01260]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS10110]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS15070]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6305]], putrescine biosynthesis IV:
+
* [[PWY-5994]], palmitate biosynthesis I (animals and fungi):
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''20''' reactions found over '''31''' reactions in the full pathway
−
* [[ORNDEG-PWY]], superpathway of ornithine degradation:
+
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants):
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''22''' reactions found over '''31''' reactions in the full pathway
−
* [[PWY-46]], putrescine biosynthesis III:
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: common-name=3-oxoacyl-acp reductase fabg|3-oxoacyl-[acyl-carrier-protein] reductase|3-oxo-dodecanoyl-[acyl-carrier protein] reductase}}
−
* RHEA:
+
{{#set: ec-number=ec-2.3.1.85|ec-2.3.1.86|ec-1.1.1.100}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22965 22965]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00670 R00670]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P24169 P24169]
 
−
** [http://www.uniprot.org/uniprot/P27121 P27121]
 
−
** [http://www.uniprot.org/uniprot/P27116 P27116]
 
−
** [http://www.uniprot.org/uniprot/P27120 P27120]
 
−
** [http://www.uniprot.org/uniprot/P43099 P43099]
 
−
** [http://www.uniprot.org/uniprot/Q9X2I6 Q9X2I6]
 
−
** [http://www.uniprot.org/uniprot/P08432 P08432]
 
−
** [http://www.uniprot.org/uniprot/P27118 P27118]
 
−
** [http://www.uniprot.org/uniprot/P11926 P11926]
 
−
** [http://www.uniprot.org/uniprot/P14019 P14019]
 
−
** [http://www.uniprot.org/uniprot/P00860 P00860]
 
−
** [http://www.uniprot.org/uniprot/P09057 P09057]
 
−
** [http://www.uniprot.org/uniprot/Q9TZZ6 Q9TZZ6]
 
−
** [http://www.uniprot.org/uniprot/P44317 P44317]
 
−
** [http://www.uniprot.org/uniprot/O66940 O66940]
 
−
** [http://www.uniprot.org/uniprot/P27119 P27119]
 
−
** [http://www.uniprot.org/uniprot/P49725 P49725]
 
−
** [http://www.uniprot.org/uniprot/P50134 P50134]
 
−
** [http://www.uniprot.org/uniprot/P93351 P93351]
 
−
** [http://www.uniprot.org/uniprot/P93357 P93357]
 
−
** [http://www.uniprot.org/uniprot/O15696 O15696]
 
−
** [http://www.uniprot.org/uniprot/Q84527 Q84527]
 
−
** [http://www.uniprot.org/uniprot/P41931 P41931]
 
−
** [http://www.uniprot.org/uniprot/O69865 O69865]
 
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** [http://www.uniprot.org/uniprot/Q9UQW9 Q9UQW9]
 
−
</div>
 
−
{{#set: ec-number=ec-4.1.1.17}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: nb gene associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction source=genome}}

Revision as of 19:05, 13 January 2021

Reaction RXN-9532

  • common-name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • 3-oxoacyl-acp reductase fabg
  • ec-number:
  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5994, palmitate biosynthesis I (animals and fungi):
    • 20 reactions found over 31 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants):
    • 22 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

  • Property "Common-name" (as page type) with input value "3-oxoacyl-[acyl-carrier-protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
  • Property "Common-name" (as page type) with input value "3-oxo-dodecanoyl-[acyl-carrier protein] reductase" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.





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