Difference between revisions of "FSU RS13520"

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(Created page with "Category:reaction == Reaction TransportSeed-FE+3 == * direction: ** left-to-right == Reaction formula == * 1.0 FE+3[e] '''=>''' 1.0 FE+3[c] == Gene(s) associated w...")
(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8] * direction: ** left-to-right * common-name: ** acyl-coa...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction TransportSeed-FE+3 ==
+
== Reaction ACYLCOADEHYDROG-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** acyl-coa dehydrogenase
 +
* synonymous:
 +
** acyl coenzyme a dehydrogenase
 +
** general acyl coa dehydrogenase
 +
** long-chain acyl coenzyme a dehydrogenase
 +
** medium-chain acyl-coenzyme a dehydrogenase
 +
** fatty acyl coenzyme a dehydrogenase
 +
** fatty-acyl-coa dehydrogenase
 +
** long-chain acyl-coa dehydrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1.0 [[FE+3]][e] '''=>''' 1.0 [[FE+3]][c]
+
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FISUC_RS04750]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 +
* Gene: [[FSU_RS06640]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[FAO-PWY]], fatty acid β-oxidation I:
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[import_from_medium]]; tool: [[curation]]; comment: added to manage seeds from extracellular to cytosol compartment
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P16219 P16219]
 +
** [http://www.uniprot.org/uniprot/P45952 P45952]
 +
** [http://www.uniprot.org/uniprot/P15651 P15651]
 +
** [http://www.uniprot.org/uniprot/P11310 P11310]
 +
** [http://www.uniprot.org/uniprot/P08503 P08503]
 +
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 +
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 +
** [http://www.uniprot.org/uniprot/P45867 P45867]
 +
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 +
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 +
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 +
{{#set: ec-number=ec-1.3.8}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=0}}
+
{{#set: common-name=acyl-coa dehydrogenase}}
−
{{#set: nb pathway associated=0}}
+
{{#set: synonymous=fatty acyl coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|general acyl coa dehydrogenase|long-chain acyl-coa dehydrogenase|acyl coenzyme a dehydrogenase|medium-chain acyl-coenzyme a dehydrogenase|fatty-acyl-coa dehydrogenase}}
−
{{#set: reconstruction category=manual}}
+
{{#set: nb gene associated=2}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction comment=added to manage seeds from extracellular to cytosol compartment}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction source=import_from_medium}}
+
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction comment=n.a}}
 +
{{#set: reconstruction source=genome}}

Revision as of 19:06, 13 January 2021

Reaction ACYLCOADEHYDROG-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • acyl-coa dehydrogenase
  • synonymous:
    • acyl coenzyme a dehydrogenase
    • general acyl coa dehydrogenase
    • long-chain acyl coenzyme a dehydrogenase
    • medium-chain acyl-coenzyme a dehydrogenase
    • fatty acyl coenzyme a dehydrogenase
    • fatty-acyl-coa dehydrogenase
    • long-chain acyl-coa dehydrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FAO-PWY, fatty acid β-oxidation I:
    • 2 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






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