Difference between revisions of "FSU RS02125"

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(Created page with "Category:reaction == Reaction RXN-13202 == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16] * direction: ** left-to-right * common-name: ** carbamoyl-pho...")
(Created page with "Category:reaction == Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60] * direction: ** left-to-rig...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-13202 ==
+
== Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.3.4.16 ec-6.3.4.16]
+
** [http://enzyme.expasy.org/EC/1.14.99.60 ec-1.14.99.60]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
+
* synonymous:
−
** carbamoyl-phosphate synthase large subunit
+
** 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''+''' 1 [[HCO3]][c] '''=>''' 2 [[ADP]][c] '''+''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[Donor-H2]][c] '''+''' 1 [[OCTAPRENYL-METHYL-METHOXY-BENZQ]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Acceptor]][c] '''+''' 1 [[OCTAPRENYL-METHYL-OH-METHOXY-BENZQ]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS00955]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS00960]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FSU_RS06080]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS14765]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS14770]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
* Gene: [[FISUC_RS04185]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-4984]], urea cycle:
+
* [[PWY-5870]], ubiquinol-8 biosynthesis (eukaryotic):
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
 +
** '''8''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/O15829 O15829]
 
−
** [http://www.uniprot.org/uniprot/O15830 O15830]
 
−
** [http://www.uniprot.org/uniprot/P07756 P07756]
 
−
** [http://www.uniprot.org/uniprot/P31327 P31327]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
 
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29404 29404]
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
+
{{#set: ec-number=ec-1.14.99.60}}
−
{{#set: ec-number=ec-6.3.4.16}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=carbamoyl-phosphate synthase large subunit}}
+
{{#set: synonymous=2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=to improve flux}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}

Revision as of 19:09, 13 January 2021

Reaction OCTAPRENYL-METHYL-METHOXY-BENZOQ-OH-RXN

  • ec-number:
  • direction:
    • left-to-right
  • synonymous:
    • 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5870, ubiquinol-8 biosynthesis (eukaryotic):
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





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