Difference between revisions of "FSU RS02910"

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(Created page with "Category:reaction == Reaction GMP-SYN-NH3-RXN == * direction: ** left-to-right * common-name: ** glutamine-hydrolyzing gmp synthase == Reaction formula == * 1 AMMONIUM...")
(Created page with "Category:reaction == Reaction O-SUCCHOMOSERLYASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48] * direction: ** reversible == Reaction formula =...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GMP-SYN-NH3-RXN ==
+
== Reaction O-SUCCHOMOSERLYASE-RXN ==
 +
* ec-number:
 +
** [http://enzyme.expasy.org/EC/2.5.1.48 ec-2.5.1.48]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** glutamine-hydrolyzing gmp synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[AMMONIUM]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[CYS]][c] '''+''' 1 [[O-SUCCINYL-L-HOMOSERINE]][c] '''<=>''' 1 [[L-CYSTATHIONINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SUC]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS14995]]
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* Gene: [[FSU_RS07240]]
−
** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FSU_RS01185]]
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* Gene: [[FSU_RS07525]]
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** Category: [[annotation]]
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** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS02705]]
 +
** Category: [[orthology]]
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-I9]], L-cysteine biosynthesis VI (from L-methionine):
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-801]], homocysteine and cysteine interconversion:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18302 18302]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20397 20397]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01230 R01230]
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** [http://www.genome.jp/dbget-bin/www_bget?R03260 R03260]
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{{#set: direction=left-to-right}}
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* UNIPROT:
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{{#set: common-name=glutamine-hydrolyzing gmp synthase}}
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** [http://www.uniprot.org/uniprot/P0A4K2 P0A4K2]
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{{#set: nb gene associated=2}}
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** [http://www.uniprot.org/uniprot/Q9CEC6 Q9CEC6]
−
{{#set: nb pathway associated=0}}
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** [http://www.uniprot.org/uniprot/P38675 P38675]
−
{{#set: reconstruction category=annotation}}
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** [http://www.uniprot.org/uniprot/P24601 P24601]
−
{{#set: reconstruction tool=pathwaytools}}
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** [http://www.uniprot.org/uniprot/P00935 P00935]
 +
** [http://www.uniprot.org/uniprot/O04981 O04981]
 +
** [http://www.uniprot.org/uniprot/O04982 O04982]
 +
** [http://www.uniprot.org/uniprot/O81334 O81334]
 +
** [http://www.uniprot.org/uniprot/Q79VD9 Q79VD9]
 +
{{#set: ec-number=ec-2.5.1.48}}
 +
{{#set: direction=reversible}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=3}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=bifidobacterium|faecalibacterium|ecoli}}

Revision as of 19:09, 13 January 2021

Reaction O-SUCCHOMOSERLYASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-I9, L-cysteine biosynthesis VI (from L-methionine):
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-801, homocysteine and cysteine interconversion:
    • 2 reactions found over 4 reactions in the full pathway
  • HOMOSER-METSYN-PWY, L-methionine biosynthesis I:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





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