Difference between revisions of "FISUC RS10855"

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(Created page with "Category:reaction == Reaction RXN-17011 == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51] * direction: ** left-to-right * common-name: ** 1-acyl-sn-gly...")
(Created page with "Category:reaction == Reaction FPPSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.10 ec-2.5.1.10] * direction: ** left-to-right == Reaction formula == * 1 D...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-17011 ==
+
== Reaction FPPSYN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.3.1.51 ec-2.3.1.51]
+
** [http://enzyme.expasy.org/EC/2.5.1.10 ec-2.5.1.10]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** 1-acyl-sn-glycerol-3-phosphate acyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CPD-18346]][c] '''+''' 1 [[CPD-18348]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-18353]][c]
+
* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYL-PP]][c] '''=>''' 1 [[FARNESYL-PP]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01330]]
+
* Gene: [[FSU_RS10165]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FSU_RS00315]]
+
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
** Category: [[annotation]]
+
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FSU_RS07430]]
+
* Gene: [[FSU_RS06175]]
−
** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
−
* Gene: [[FISUC_RS14120]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS15140]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS05530]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-7736]], stellatic acid biosynthesis:
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5123]], trans, trans-farnesyl diphosphate biosynthesis:
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6859]], all-trans-farnesol biosynthesis:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7102]], bisabolene biosynthesis (engineered):
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7721]], methyl phomopsenoate biosynthesis:
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-2.3.1.51}}
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19361 19361]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02003 R02003]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P08524 P08524]
 +
** [http://www.uniprot.org/uniprot/P05369 P05369]
 +
** [http://www.uniprot.org/uniprot/P14324 P14324]
 +
** [http://www.uniprot.org/uniprot/Q9CH81 Q9CH81]
 +
** [http://www.uniprot.org/uniprot/Q9PM32 Q9PM32]
 +
** [http://www.uniprot.org/uniprot/P45204 P45204]
 +
** [http://www.uniprot.org/uniprot/Q9JSM0 Q9JSM0]
 +
** [http://www.uniprot.org/uniprot/P49350 P49350]
 +
** [http://www.uniprot.org/uniprot/P22939 P22939]
 +
** [http://www.uniprot.org/uniprot/Q08291 Q08291]
 +
** [http://www.uniprot.org/uniprot/P49349 P49349]
 +
** [http://www.uniprot.org/uniprot/Q09152 Q09152]
 +
** [http://www.uniprot.org/uniprot/P49351 P49351]
 +
** [http://www.uniprot.org/uniprot/P49352 P49352]
 +
** [http://www.uniprot.org/uniprot/Q43315 Q43315]
 +
** [http://www.uniprot.org/uniprot/O24241 O24241]
 +
** [http://www.uniprot.org/uniprot/O24242 O24242]
 +
** [http://www.uniprot.org/uniprot/Q92334 Q92334]
 +
** [http://www.uniprot.org/uniprot/Q92218 Q92218]
 +
** [http://www.uniprot.org/uniprot/Q92235 Q92235]
 +
** [http://www.uniprot.org/uniprot/Q92250 Q92250]
 +
** [http://www.uniprot.org/uniprot/Q8L7F4 Q8L7F4]
 +
** [http://www.uniprot.org/uniprot/P49353 P49353]
 +
** [http://www.uniprot.org/uniprot/O04882 O04882]
 +
** [http://www.uniprot.org/uniprot/O65004 O65004]
 +
** [http://www.uniprot.org/uniprot/O14230 O14230]
 +
</div>
 +
{{#set: ec-number=ec-2.5.1.10}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=1-acyl-sn-glycerol-3-phosphate acyltransferase}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb gene associated=6}}
+
{{#set: nb pathway associated=5}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=bifidobacterium|bthetaiotaomicron|ecoli|plantarum}}

Revision as of 19:35, 13 January 2021

Reaction FPPSYN-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7736, stellatic acid biosynthesis:
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-5123, trans, trans-farnesyl diphosphate biosynthesis:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6859, all-trans-farnesol biosynthesis:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7102, bisabolene biosynthesis (engineered):
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7721, methyl phomopsenoate biosynthesis:
    • 2 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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