Difference between revisions of "FISUC RS15510"

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(Created page with "Category:reaction == Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.44 ec-2.6.1.44] * direction: ** reversible ==...")
(Created page with "Category:reaction == Reaction SERINE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11] * direction: ** left-to-right * common-name: **...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ALANINE--GLYOXYLATE-AMINOTRANSFERASE-RXN ==
+
== Reaction SERINE--TRNA-LIGASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.6.1.44 ec-2.6.1.44]
+
** [http://enzyme.expasy.org/EC/6.1.1.11 ec-6.1.1.11]
 
* direction:
 
* direction:
−
** reversible
+
** left-to-right
 +
* common-name:
 +
** serine--trna ligase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GLYOX]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''<=>''' 1 [[GLY]][c] '''+''' 1 [[PYRUVATE]][c]
+
* 1 [[ATP]][c] '''+''' 1 [[SER]][c] '''+''' 1 [[SER-tRNAs]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-SER-tRNAs]][c] '''+''' 1 [[PPI]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
 +
* Gene: [[FSU_RS14025]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS12055]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[GLYSYN-ALA-PWY]], glycine biosynthesis III:
+
* [[TRNA-CHARGING-PWY]], tRNA charging:
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_gp]]; tool: [[curation]]; comment: added for gap-filling
+
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24248 24248]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12293 12293]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00369 R00369]
+
** [http://www.genome.jp/dbget-bin/www_bget?R03662 R03662]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P31029 P31029]
+
** [http://www.uniprot.org/uniprot/Q9ZCG5 Q9ZCG5]
−
** [http://www.uniprot.org/uniprot/P31030 P31030]
+
** [http://www.uniprot.org/uniprot/O51244 O51244]
−
** [http://www.uniprot.org/uniprot/P41689 P41689]
+
** [http://www.uniprot.org/uniprot/O66647 O66647]
−
** [http://www.uniprot.org/uniprot/Q94055 Q94055]
+
** [http://www.uniprot.org/uniprot/Q9PIB3 Q9PIB3]
−
** [http://www.uniprot.org/uniprot/Q56YA5 Q56YA5]
+
** [http://www.uniprot.org/uniprot/Q58477 Q58477]
−
** [http://www.uniprot.org/uniprot/P21549 P21549]
+
** [http://www.uniprot.org/uniprot/O27194 O27194]
−
{{#set: ec-number=ec-2.6.1.44}}
+
** [http://www.uniprot.org/uniprot/O84734 O84734]
−
{{#set: direction=reversible}}
+
** [http://www.uniprot.org/uniprot/Q9X199 Q9X199]
−
{{#set: nb gene associated=0}}
+
** [http://www.uniprot.org/uniprot/P47251 P47251]
 +
** [http://www.uniprot.org/uniprot/Q9JT77 Q9JT77]
 +
** [http://www.uniprot.org/uniprot/O83653 O83653]
 +
** [http://www.uniprot.org/uniprot/Q9Z736 Q9Z736]
 +
** [http://www.uniprot.org/uniprot/P49591 P49591]
 +
** [http://www.uniprot.org/uniprot/P56458 P56458]
 +
** [http://www.uniprot.org/uniprot/Q9ZJD9 Q9ZJD9]
 +
** [http://www.uniprot.org/uniprot/Q9CEX2 Q9CEX2]
 +
** [http://www.uniprot.org/uniprot/P43833 P43833]
 +
** [http://www.uniprot.org/uniprot/P26636 P26636]
 +
** [http://www.uniprot.org/uniprot/P39919 P39919]
 +
** [http://www.uniprot.org/uniprot/P37464 P37464]
 +
** [http://www.uniprot.org/uniprot/Q39230 Q39230]
 +
** [http://www.uniprot.org/uniprot/P75107 P75107]
 +
** [http://www.uniprot.org/uniprot/P73201 P73201]
 +
** [http://www.uniprot.org/uniprot/O82108 O82108]
 +
** [http://www.uniprot.org/uniprot/O82110 O82110]
 +
** [http://www.uniprot.org/uniprot/O81983 O81983]
 +
** [http://www.uniprot.org/uniprot/O45887 O45887]
 +
** [http://www.uniprot.org/uniprot/O14018 O14018]
 +
** [http://www.uniprot.org/uniprot/P54221 P54221]
 +
** [http://www.uniprot.org/uniprot/P07284 P07284]
 +
** [http://www.uniprot.org/uniprot/P0A8L1 P0A8L1]
 +
</div>
 +
{{#set: ec-number=ec-6.1.1.11}}
 +
{{#set: direction=left-to-right}}
 +
{{#set: common-name=serine--trna ligase}}
 +
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction comment=added for gap-filling}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_gp}}
+
{{#set: reconstruction source=genome}}

Revision as of 19:36, 13 January 2021

Reaction SERINE--TRNA-LIGASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • serine--trna ligase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • TRNA-CHARGING-PWY, tRNA charging:
    • 21 reactions found over 21 reactions in the full pathway

Reconstruction information

External links





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