Difference between revisions of "FISUC RS02460"

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(Created page with "Category:reaction == Reaction RXN-10780 == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3] * direction: ** left-to-right == Reaction formula == * 1 5-HY...")
(Created page with "Category:reaction == Reaction FORMYLMETHIONINE-DEFORMYLASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.1.31 ec-3.5.1.31] * direction: ** left-to-right == React...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-10780 ==
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== Reaction FORMYLMETHIONINE-DEFORMYLASE-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/1.2.1.3 ec-1.2.1.3]
+
** [http://enzyme.expasy.org/EC/3.5.1.31 ec-3.5.1.31]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[5-HYDROXYINDOLE_ACETALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYINDOLE_ACETATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
+
* 1 [[N-FORMYLMETHIONINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[FORMATE]][c] '''+''' 1 [[MET]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS01755]]
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* Gene: [[FSU_RS14045]]
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** Category: [[manual]]
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** Category: [[orthology]]
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
+
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6313]], serotonin degradation:
 
−
** '''2''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31216 31216]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17781 17781]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04903 R04903]
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** [http://www.genome.jp/dbget-bin/www_bget?R00653 R00653]
−
{{#set: ec-number=ec-1.2.1.3}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P63916 P63916]
 +
** [http://www.uniprot.org/uniprot/Q9PIT8 Q9PIT8]
 +
{{#set: ec-number=ec-3.5.1.31}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
−
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=0}}
−
{{#set: reconstruction category=manual}}
+
{{#set: reconstruction category=orthology}}
−
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=orthofinder}}
−
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=reactions_add_147_emile_annot}}
+
{{#set: reconstruction source=plantarum}}

Revision as of 19:36, 13 January 2021

Reaction FORMYLMETHIONINE-DEFORMYLASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links





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