Difference between revisions of "FSU RS13520"

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(Created page with "Category:reaction == Reaction ACYLCOADEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8] * direction: ** left-to-right * common-name: ** acyl-coa...")
(Created page with "Category:reaction == Reaction LYSINE-23-AMINOMUTASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.3.2 ec-5.4.3.2] * direction: ** left-to-right == Reaction formu...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction ACYLCOADEHYDROG-RXN ==
+
== Reaction LYSINE-23-AMINOMUTASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/1.3.8 ec-1.3.8]
+
** [http://enzyme.expasy.org/EC/5.4.3.2 ec-5.4.3.2]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** acyl-coa dehydrogenase
 
* synonymous:
 
** acyl coenzyme a dehydrogenase
 
** general acyl coa dehydrogenase
 
** long-chain acyl coenzyme a dehydrogenase
 
** medium-chain acyl-coenzyme a dehydrogenase
 
** fatty acyl coenzyme a dehydrogenase
 
** fatty-acyl-coa dehydrogenase
 
** long-chain acyl-coa dehydrogenase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
+
* 1 [[LYS]][c] '''=>''' 1 [[CPD-233]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS04750]]
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* Gene: [[FSU_RS14710]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
* Gene: [[FSU_RS06640]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[FAO-PWY]], fatty acid β-oxidation I:
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* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
** '''2''' reactions found over '''7''' reactions in the full pathway
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** '''3''' reactions found over '''10''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44705 44705]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19178 19178]
* UNIPROT:
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* LIGAND-RXN:
** [http://www.uniprot.org/uniprot/P16219 P16219]
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** [http://www.genome.jp/dbget-bin/www_bget?R00461 R00461]
** [http://www.uniprot.org/uniprot/P45952 P45952]
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{{#set: ec-number=ec-5.4.3.2}}
** [http://www.uniprot.org/uniprot/P15651 P15651]
 
** [http://www.uniprot.org/uniprot/P11310 P11310]
 
** [http://www.uniprot.org/uniprot/P08503 P08503]
 
** [http://www.uniprot.org/uniprot/Q07417 Q07417]
 
** [http://www.uniprot.org/uniprot/Q54857 Q54857]
 
** [http://www.uniprot.org/uniprot/P45867 P45867]
 
** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
 
** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
 
** [http://www.uniprot.org/uniprot/Q96329 Q96329]
 
{{#set: ec-number=ec-1.3.8}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=acyl-coa dehydrogenase}}
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{{#set: nb gene associated=1}}
{{#set: synonymous=fatty acyl coenzyme a dehydrogenase|long-chain acyl coenzyme a dehydrogenase|general acyl coa dehydrogenase|long-chain acyl-coa dehydrogenase|acyl coenzyme a dehydrogenase|medium-chain acyl-coenzyme a dehydrogenase|fatty-acyl-coa dehydrogenase}}
 
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=manual}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=reactions_add_147_emile_annot}}

Revision as of 19:36, 13 January 2021

Reaction LYSINE-23-AMINOMUTASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • P163-PWY, L-lysine fermentation to acetate and butanoate:
    • 3 reactions found over 10 reactions in the full pathway

Reconstruction information

External links