Difference between revisions of "FSU RS04110"

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(Created page with "Category:reaction == Reaction RXN-12184 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
(Created page with "Category:reaction == Reaction ASPDECARBOX-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.11 ec-4.1.1.11] * direction: ** left-to-right * common-name: ** asparta...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12184 ==
+
== Reaction ASPDECARBOX-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/4.1.1.11 ec-4.1.1.11]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** long-chain fatty acid--coa ligase
+
** aspartate 1-decarboxylase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17637]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17638]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[B-ALANINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS14015]]
+
* Gene: [[FISUC_RS02275]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS12045]]
+
* Gene: [[FSU_RS04165]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
+
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6733]], sporopollenin precursors biosynthesis:
+
* [[PWY-5155]], β-alanine biosynthesis III:
−
** '''4''' reactions found over '''18''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
−
{{#set: ec-number=ec-6.2.1.3}}
+
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19498 19498]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00489 R00489]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P52999 P52999]
 +
** [http://www.uniprot.org/uniprot/O66773 O66773]
 +
** [http://www.uniprot.org/uniprot/Q9JZ56 Q9JZ56]
 +
** [http://www.uniprot.org/uniprot/P56065 P56065]
 +
** [http://www.uniprot.org/uniprot/P65660 P65660]
 +
** [http://www.uniprot.org/uniprot/P0A790 P0A790]
 +
** [http://www.uniprot.org/uniprot/Q9X037 Q9X037]
 +
** [http://www.uniprot.org/uniprot/Q9ZN30 Q9ZN30]
 +
** [http://www.uniprot.org/uniprot/Q9PIK3 Q9PIK3]
 +
** [http://www.uniprot.org/uniprot/Q9JU49 Q9JU49]
 +
** [http://www.uniprot.org/uniprot/Q9RWF1 Q9RWF1]
 +
** [http://www.uniprot.org/uniprot/Q55382 Q55382]
 +
{{#set: ec-number=ec-4.1.1.11}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=long-chain fatty acid--coa ligase}}
+
{{#set: common-name=aspartate 1-decarboxylase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=annotation|orthology}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder|pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=plantarum|genome|bthetaiotaomicron|ecoli}}

Revision as of 19:39, 13 January 2021

Reaction ASPDECARBOX-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • aspartate 1-decarboxylase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5155, β-alanine biosynthesis III:
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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