Difference between revisions of "FISUC RS12770"

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(Created page with "Category:reaction == Reaction ASPARTATE--TRNA-LIGASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12] * direction: ** left-to-right * common-name:...")
(Created page with "Category:reaction == Reaction DIHYDRODIPICSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7] * direction: ** left-to-right * common-name: ** 4-hyd...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction ASPARTATE--TRNA-LIGASE-RXN ==
+
== Reaction DIHYDRODIPICSYN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/6.1.1.12 ec-6.1.1.12]
+
** [http://enzyme.expasy.org/EC/4.3.3.7 ec-4.3.3.7]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** aspartate--trna ligase
+
** 4-hydroxy-tetrahydrodipicolinate synthase
 +
* synonymous:
 +
** dihydrodipicolinic acid synthase
 +
** dihydropicolinate synthetase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[ASP-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-ASPARTATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[Charged-ASP-tRNAs]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[L-ASPARTATE-SEMIALDEHYDE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CPD-14443]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS00430]]
+
* Gene: [[FSU_RS03675]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS14240]]
+
* Gene: [[FISUC_RS01795]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging:
+
* [[PWY-2941]], L-lysine biosynthesis II:
−
** '''21''' reactions found over '''21''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5097]], L-lysine biosynthesis VI:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[DAPLYSINESYN-PWY]], L-lysine biosynthesis I:
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-2942]], L-lysine biosynthesis III:
 +
** '''7''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19650 19650]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577]
+
** [http://www.genome.jp/dbget-bin/www_bget?R10147 R10147]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R02292 R02292]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P56459 P56459]
+
** [http://www.uniprot.org/uniprot/P43797 P43797]
−
** [http://www.uniprot.org/uniprot/O26328 O26328]
+
** [http://www.uniprot.org/uniprot/O26892 O26892]
−
** [http://www.uniprot.org/uniprot/O83950 O83950]
+
** [http://www.uniprot.org/uniprot/Q9Z6K9 Q9Z6K9]
−
** [http://www.uniprot.org/uniprot/Q58950 Q58950]
+
** [http://www.uniprot.org/uniprot/Q9X1K9 Q9X1K9]
−
** [http://www.uniprot.org/uniprot/Q9ZLL9 Q9ZLL9]
+
** [http://www.uniprot.org/uniprot/P19808 P19808]
−
** [http://www.uniprot.org/uniprot/O32038 O32038]
+
** [http://www.uniprot.org/uniprot/Q9ZM13 Q9ZM13]
−
** [http://www.uniprot.org/uniprot/O67589 O67589]
+
** [http://www.uniprot.org/uniprot/O05969 O05969]
−
** [http://www.uniprot.org/uniprot/P43817 P43817]
+
** [http://www.uniprot.org/uniprot/Q9CF61 Q9CF61]
−
** [http://www.uniprot.org/uniprot/O51402 O51402]
+
** [http://www.uniprot.org/uniprot/Q04796 Q04796]
−
** [http://www.uniprot.org/uniprot/Q9CE80 Q9CE80]
+
** [http://www.uniprot.org/uniprot/Q57695 Q57695]
−
** [http://www.uniprot.org/uniprot/Q9ZE17 Q9ZE17]
+
** [http://www.uniprot.org/uniprot/O25657 O25657]
−
** [http://www.uniprot.org/uniprot/Q9X1F4 Q9X1F4]
+
** [http://www.uniprot.org/uniprot/O67216 O67216]
−
** [http://www.uniprot.org/uniprot/Q9JT23 Q9JT23]
+
** [http://www.uniprot.org/uniprot/O29352 O29352]
−
** [http://www.uniprot.org/uniprot/O58776 O58776]
+
** [http://www.uniprot.org/uniprot/O84366 O84366]
−
** [http://www.uniprot.org/uniprot/O84546 O84546]
+
** [http://www.uniprot.org/uniprot/Q9PPB4 Q9PPB4]
−
** [http://www.uniprot.org/uniprot/Q9Z7P2 Q9Z7P2]
+
** [http://www.uniprot.org/uniprot/P63945 P63945]
−
** [http://www.uniprot.org/uniprot/Q9PHM7 Q9PHM7]
+
** [http://www.uniprot.org/uniprot/Q9JUU9 Q9JUU9]
−
** [http://www.uniprot.org/uniprot/P47282 P47282]
+
** [http://www.uniprot.org/uniprot/Q9LZX6 Q9LZX6]
−
** [http://www.uniprot.org/uniprot/Q51422 Q51422]
+
** [http://www.uniprot.org/uniprot/Q43038 Q43038]
−
** [http://www.uniprot.org/uniprot/Q03577 Q03577]
+
** [http://www.uniprot.org/uniprot/P49423 P49423]
−
** [http://www.uniprot.org/uniprot/P36429 P36429]
+
** [http://www.uniprot.org/uniprot/Q55513 Q55513]
−
** [http://www.uniprot.org/uniprot/P75068 P75068]
+
** [http://www.uniprot.org/uniprot/P0A6L2 P0A6L2]
−
** [http://www.uniprot.org/uniprot/P73851 P73851]
+
** [http://www.uniprot.org/uniprot/Q42948 Q42948]
−
** [http://www.uniprot.org/uniprot/Q48979 Q48979]
+
** [http://www.uniprot.org/uniprot/Q42940 Q42940]
−
** [http://www.uniprot.org/uniprot/Q49028 Q49028]
+
** [http://www.uniprot.org/uniprot/O86841 O86841]
−
** [http://www.uniprot.org/uniprot/P04802 P04802]
+
** [http://www.uniprot.org/uniprot/P24847 P24847]
−
** [http://www.uniprot.org/uniprot/P15179 P15179]
+
** [http://www.uniprot.org/uniprot/P24846 P24846]
−
** [http://www.uniprot.org/uniprot/P21889 P21889]
 
−
** [http://www.uniprot.org/uniprot/P14868 P14868]
 
−
** [http://www.uniprot.org/uniprot/P15178 P15178]
 
−
** [http://www.uniprot.org/uniprot/O81892 O81892]
 
−
** [http://www.uniprot.org/uniprot/O74407 O74407]
 
−
** [http://www.uniprot.org/uniprot/O07683 O07683]
 
 
</div>
 
</div>
−
{{#set: ec-number=ec-6.1.1.12}}
+
{{#set: ec-number=ec-4.3.3.7}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=aspartate--trna ligase}}
+
{{#set: common-name=4-hydroxy-tetrahydrodipicolinate synthase}}
 +
{{#set: synonymous=dihydrodipicolinic acid synthase|dihydropicolinate synthetase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=4}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 
{{#set: reconstruction source=genome}}

Revision as of 19:39, 13 January 2021

Reaction DIHYDRODIPICSYN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • 4-hydroxy-tetrahydrodipicolinate synthase
  • synonymous:
    • dihydrodipicolinic acid synthase
    • dihydropicolinate synthetase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2941, L-lysine biosynthesis II:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-5097, L-lysine biosynthesis VI:
    • 7 reactions found over 7 reactions in the full pathway
  • DAPLYSINESYN-PWY, L-lysine biosynthesis I:
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-2942, L-lysine biosynthesis III:
    • 7 reactions found over 7 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS12770&oldid=61994"