Difference between revisions of "FISUC RS11085"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction RXN0-5462 == * ec-number: ** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1] ** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2] ** [http://...")
(Created page with "Category:reaction == Reaction FMNREDUCT-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.5.1.39 ec-1.5.1.39] * direction: ** left-to-right == Reaction formula == * 1...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN0-5462 ==
+
== Reaction FMNREDUCT-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.6.5.1 ec-3.6.5.1]
+
** [http://enzyme.expasy.org/EC/1.5.1.39 ec-1.5.1.39]
−
** [http://enzyme.expasy.org/EC/3.6.5.2 ec-3.6.5.2]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.3 ec-3.6.5.3]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.4 ec-3.6.5.4]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.5 ec-3.6.5.5]
 
−
** [http://enzyme.expasy.org/EC/3.6.5.6 ec-3.6.5.6]
 
−
** [http://enzyme.expasy.org/EC/3.6.1.15 ec-3.6.1.15]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** gtpase hflx
 
−
** ribosome small subunit-dependent gtpase a
 
−
** gtpase
 
−
** gtpase obge
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GDP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
+
* 1 [[FMN]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[FMNH2]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* Gene: [[FSU_RS13015]]
−
* Gene: [[FSU_RS01580]]
+
** Category: [[manual]]
−
** Category: [[annotation]]
+
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS03610]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS03025]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS01145]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS00240]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS15385]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FISUC_RS01730]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS02110]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
</div>
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[PWY-5523]], 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-7723]], bacterial bioluminescence:
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19670 19670]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21622 21622]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00335 R00335]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05706 R05706]
−
{{#set: ec-number=ec-3.6.5.1|ec-3.6.5.5|ec-3.6.5.4|ec-3.6.5.2|ec-3.6.5.6|ec-3.6.5.3|ec-3.6.1.15}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/P0AEN1 P0AEN1]
 +
{{#set: ec-number=ec-1.5.1.39}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=ribosome small subunit-dependent gtpase a|gtpase hflx|gtpase obge|gtpase}}
+
{{#set: nb gene associated=1}}
−
{{#set: nb gene associated=8}}
+
{{#set: nb pathway associated=2}}
−
{{#set: nb pathway associated=0}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_add_147_emile_annot}}
−
{{#set: reconstruction source=genome|ecoli}}
 

Revision as of 19:39, 13 January 2021

Reaction FMNREDUCT-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-5523, 5,6-dimethylbenzimidazole biosynthesis I (aerobic):
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7723, bacterial bioluminescence:
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS11085&oldid=62001"