Difference between revisions of "FSU RS13520"

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(Created page with "Category:reaction == Reaction LYSINE-23-AMINOMUTASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.4.3.2 ec-5.4.3.2] * direction: ** left-to-right == Reaction formu...")
(Created page with "Category:reaction == Reaction GLYCOLATE-REDUCTASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.1.1.26 ec-1.1.1.26] * direction: ** reversible == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction LYSINE-23-AMINOMUTASE-RXN ==
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== Reaction GLYCOLATE-REDUCTASE-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/5.4.3.2 ec-5.4.3.2]
+
** [http://enzyme.expasy.org/EC/1.1.1.26 ec-1.1.1.26]
 
* direction:
 
* direction:
** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[LYS]][c] '''=>''' 1 [[CPD-233]][c]
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* 1 [[GLYCOLLATE]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[GLYOX]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS14710]]
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* Gene: [[FSU_RS15335]]
** Category: [[manual]]
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** Category: [[orthology]]
*** Source: [[reactions_add_147_emile_annot]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the annotation part of the emile network.
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[P163-PWY]], L-lysine fermentation to acetate and butanoate:
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* [[PWY-7294]], D-xylose degradation IV:
** '''3''' reactions found over '''10''' reactions in the full pathway
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** '''3''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7295]], L-arabinose degradation IV:
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[manual]]; source: [[reactions_add_147_emile_annot]]; tool: [[curation]]; comment: present in the annotation part of the emile network.
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19178 19178]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18232 18232]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R00461 R00461]
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** [http://www.genome.jp/dbget-bin/www_bget?R00717 R00717]
{{#set: ec-number=ec-5.4.3.2}}
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{{#set: ec-number=ec-1.1.1.26}}
{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
 
{{#set: nb gene associated=1}}
 
{{#set: nb gene associated=1}}
{{#set: nb pathway associated=1}}
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{{#set: nb pathway associated=2}}
{{#set: reconstruction category=manual}}
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{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=curation}}
+
{{#set: reconstruction tool=orthofinder}}
{{#set: reconstruction comment=present in the annotation part of the emile network.}}
+
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=reactions_add_147_emile_annot}}
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{{#set: reconstruction source=ecoli}}

Revision as of 11:59, 15 January 2021

Reaction GLYCOLATE-REDUCTASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7294, D-xylose degradation IV:
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7295, L-arabinose degradation IV:
    • 1 reactions found over 8 reactions in the full pathway

Reconstruction information

External links