Difference between revisions of "FSU RS05775"

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(Created page with "Category:reaction == Reaction RXN-8813 == * ec-number: ** [http://enzyme.expasy.org/EC/2.5.1.81 ec-2.5.1.81] * direction: ** left-to-right == Reaction formula == * 1 DEL...")
(Created page with "Category:reaction == Reaction TRANS-RXN-30 == * common-name: ** xylose:proton symport * direction: ** reversible == Reaction formula == * 1 D-Xylose[e] '''+''' 1 PRO...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction RXN-8813 ==
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== Reaction TRANS-RXN-30 ==
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* ec-number:
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* common-name:
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** [http://enzyme.expasy.org/EC/2.5.1.81 ec-2.5.1.81]
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** xylose:proton symport
 
* direction:
 
* direction:
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** left-to-right
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** reversible
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[DELTA3-ISOPENTENYL-PP]][c] '''+''' 1 [[GERANYLGERANYL-PP]][c] '''=>''' 1 [[ALL-TRANS-PENTAPRENYL-DIPHOSPHATE]][c] '''+''' 1 [[PPI]][c]
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* 1 [[D-Xylose]][e] '''+''' 1 [[PROTON]][e] '''<=>''' 1 [[D-Xylose]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS10165]]
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* Gene: [[FISUC_RS09005]]
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** Category: [[manual]]
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** Category: [[orthology]]
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FSU_RS06175]]
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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** Category: [[manual]]
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* Gene: [[FSU_RS10945]]
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
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** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7720]], ophiobolin F biosynthesis:
 
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** '''2''' reactions found over '''3''' reactions in the full pathway
 
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* [[PWY-7736]], stellatic acid biosynthesis:
 
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** '''4''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: common-name=xylose:proton symport}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25697 25697]
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{{#set: direction=reversible}}
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* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R07475 R07475]
 
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{{#set: ec-number=ec-2.5.1.81}}
 
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{{#set: direction=left-to-right}}
 
 
{{#set: nb gene associated=2}}
 
{{#set: nb gene associated=2}}
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{{#set: nb pathway associated=2}}
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{{#set: nb pathway associated=0}}
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{{#set: reconstruction category=manual}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=curation}}
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{{#set: reconstruction tool=orthofinder}}
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{{#set: reconstruction comment=present in the orthology part of the emile network.}}
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{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
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{{#set: reconstruction source=bthetaiotaomicron|ecoli}}

Revision as of 12:03, 15 January 2021

Reaction TRANS-RXN-30

  • common-name:
    • xylose:proton symport
  • direction:
    • reversible

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS05775&oldid=67467"