Difference between revisions of "FSU RS04110"

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(Created page with "Category:reaction == Reaction ASPDECARBOX-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.1.11 ec-4.1.1.11] * direction: ** left-to-right * common-name: ** asparta...")
(Created page with "Category:reaction == Reaction RXN-19344 == * direction: ** left-to-right == Reaction formula == * 1 CPD-689[c] '''+''' 1 Corrinoid-Adenosyltransferases[c] '''=>'''...")
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[[Category:reaction]]
 
[[Category:reaction]]
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== Reaction ASPDECARBOX-RXN ==
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== Reaction RXN-19344 ==
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* ec-number:
 
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** [http://enzyme.expasy.org/EC/4.1.1.11 ec-4.1.1.11]
 
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
−
* common-name:
 
−
** aspartate 1-decarboxylase
 
 
== Reaction formula ==
 
== Reaction formula ==
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* 1 [[L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[B-ALANINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* 1 [[CPD-689]][c] '''+''' 1 [[Corrinoid-Adenosyltransferases]][c] '''=>''' 1 [[CPD-20908]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FISUC_RS02275]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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* Gene: [[FSU_RS04165]]
 
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** Category: [[annotation]]
 
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
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** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-5155]], β-alanine biosynthesis III:
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* [[PWY-7962]], adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
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** '''1''' reactions found over '''1''' reactions in the full pathway
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** '''6''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_adenosylcobalamin]]; tool: [[curation]]; comment: added to reach cpd-691
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19498 19498]
 
−
* LIGAND-RXN:
 
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** [http://www.genome.jp/dbget-bin/www_bget?R00489 R00489]
 
−
* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P52999 P52999]
 
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** [http://www.uniprot.org/uniprot/O66773 O66773]
 
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** [http://www.uniprot.org/uniprot/Q9JZ56 Q9JZ56]
 
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** [http://www.uniprot.org/uniprot/P56065 P56065]
 
−
** [http://www.uniprot.org/uniprot/P65660 P65660]
 
−
** [http://www.uniprot.org/uniprot/P0A790 P0A790]
 
−
** [http://www.uniprot.org/uniprot/Q9X037 Q9X037]
 
−
** [http://www.uniprot.org/uniprot/Q9ZN30 Q9ZN30]
 
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** [http://www.uniprot.org/uniprot/Q9PIK3 Q9PIK3]
 
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** [http://www.uniprot.org/uniprot/Q9JU49 Q9JU49]
 
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** [http://www.uniprot.org/uniprot/Q9RWF1 Q9RWF1]
 
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** [http://www.uniprot.org/uniprot/Q55382 Q55382]
 
−
{{#set: ec-number=ec-4.1.1.11}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
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{{#set: common-name=aspartate 1-decarboxylase}}
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{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=1}}
 
{{#set: nb pathway associated=1}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction comment=added to reach cpd-691}}
−
{{#set: reconstruction source=plantarum|genome|bthetaiotaomicron|ecoli}}
+
{{#set: reconstruction source=reactions_add_adenosylcobalamin}}

Revision as of 12:03, 15 January 2021

Reaction RXN-19344

  • direction:
    • left-to-right

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-7962, adenosylcobinamide-GDP biosynthesis from cobyrinate a,c-diamide:
    • 6 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS04110&oldid=67498"