Difference between revisions of "FSU RS13255"

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(Created page with "Category:reaction == Reaction GLYCOGENSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.1.21 ec-2.4.1.21] * direction: ** reversible * common-name: ** starch syn...")
(Created page with "Category:reaction == Reaction 2-OCTAPRENYLPHENOL-HYDROX-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.14.13.240 ec-1.14.13.240] * direction: ** left-to-right == Re...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction GLYCOGENSYN-RXN ==
+
== Reaction 2-OCTAPRENYLPHENOL-HYDROX-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/2.4.1.21 ec-2.4.1.21]
+
** [http://enzyme.expasy.org/EC/1.14.13.240 ec-1.14.13.240]
 
* direction:
 
* direction:
** reversible
+
** left-to-right
* common-name:
 
** starch synthase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP-D-GLUCOSE]][c] '''<=>''' 1 [[1-4-alpha-D-Glucan]][c] '''+''' 1 [[ADP]][c]
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* 1 [[2-OCTAPRENYLPHENOL]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[2-OCTAPRENYL-6-HYDROXYPHENOL]][c] '''+''' 1 [[NADP]][c] '''+''' 1 [[WATER]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS15965]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
* Gene: [[FSU_RS16140]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[GLYCOGENSYNTH-PWY]], glycogen biosynthesis I (from ADP-D-Glucose):
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* [[PWY-6708]], ubiquinol-8 biosynthesis (prokaryotic):
** '''4''' reactions found over '''4''' reactions in the full pathway
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** '''8''' reactions found over '''8''' reactions in the full pathway
* [[PWY-622]], starch biosynthesis:
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_ibrahim_18092020]]; tool: [[curation]]; comment: to improve flux
 
== External links  ==
 
== External links  ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* RHEA:
 
* RHEA:
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18192 18192]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27791 27791]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
** [http://www.genome.jp/dbget-bin/www_bget?R02421 R02421]
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** [http://www.genome.jp/dbget-bin/www_bget?R04987 R04987]
* UNIPROT:
+
{{#set: ec-number=ec-1.14.13.240}}
** [http://www.uniprot.org/uniprot/P45179 P45179]
+
{{#set: direction=left-to-right}}
** [http://www.uniprot.org/uniprot/Q40739 Q40739]
+
{{#set: nb gene associated=0}}
** [http://www.uniprot.org/uniprot/P39125 P39125]
+
{{#set: nb pathway associated=1}}
** [http://www.uniprot.org/uniprot/Q43784 Q43784]
+
{{#set: reconstruction category=manual}}
** [http://www.uniprot.org/uniprot/P72623 P72623]
+
{{#set: reconstruction tool=curation}}
** [http://www.uniprot.org/uniprot/P0A6U8 P0A6U8]
+
{{#set: reconstruction comment=to improve flux}}
** [http://www.uniprot.org/uniprot/O48899 O48899]
+
{{#set: reconstruction source=reactions_add_ibrahim_18092020}}
** [http://www.uniprot.org/uniprot/O48900 O48900]
 
** [http://www.uniprot.org/uniprot/O49064 O49064]
 
** [http://www.uniprot.org/uniprot/Q43654 Q43654]
 
** [http://www.uniprot.org/uniprot/P93568 P93568]
 
** [http://www.uniprot.org/uniprot/O48515 O48515]
 
** [http://www.uniprot.org/uniprot/O48516 O48516]
 
** [http://www.uniprot.org/uniprot/O64925 O64925]
 
** [http://www.uniprot.org/uniprot/Q42857 Q42857]
 
** [http://www.uniprot.org/uniprot/Q00775 Q00775]
 
</div>
 
{{#set: ec-number=ec-2.4.1.21}}
 
{{#set: direction=reversible}}
 
{{#set: common-name=starch synthase}}
 
{{#set: nb gene associated=2}}
 
{{#set: nb pathway associated=2}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction source=genome}}
 

Revision as of 12:03, 15 January 2021

Reaction 2-OCTAPRENYLPHENOL-HYDROX-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6708, ubiquinol-8 biosynthesis (prokaryotic):
    • 8 reactions found over 8 reactions in the full pathway

Reconstruction information

External links