Difference between revisions of "CPD-551"

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(Created page with "Category:gene == Gene FSU_RS06255 == * transcription-direction: ** negative * centisome-position: ** 39.945446 * left-end-position: ** 1535105 * right-end-position: **...")
(Created page with "Category:gene == Gene FSU_RS00425 == * transcription-direction: ** positive * centisome-position: ** 2.5464716 * left-end-position: ** 97861 * right-end-position: ** 9...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS06255 ==
+
== Gene FSU_RS00425 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* centisome-position:
 
* centisome-position:
−
** 39.945446    
+
** 2.5464716    
 
* left-end-position:
 
* left-end-position:
−
** 1535105
+
** 97861
 
* right-end-position:
 
* right-end-position:
−
** 1535920
+
** 99501
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_final_03112020]]
+
* [[fibrobacter_18032021]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEPTIDYLPROLYL-ISOMERASE-RXN]]
+
* [[ACETOLACTSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: centisome-position=39.945446   }}
+
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
−
{{#set: left-end-position=1535105}}
+
* [[ACETOOHBUTSYN-RXN]]
−
{{#set: right-end-position=1535920}}
+
** Category: [[annotation]]
−
{{#set: organism associated=fibrobacter_final_03112020}}
+
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: nb reaction associated=1}}
+
** Category: [[orthology]]
 +
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* [[GLYOCARBOLIG-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-7111]]
 +
** '''4''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5939]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6389]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5938]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[VALSYN-PWY]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5103]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[ILEUSYN-PWY]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-5104]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5101]]
 +
** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[GLYCOLATEMET-PWY]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: centisome-position=2.5464716   }}
 +
{{#set: left-end-position=97861}}
 +
{{#set: right-end-position=99501}}
 +
{{#set: organism associated=fibrobacter_18032021}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=10}}

Revision as of 15:51, 18 March 2021

Gene FSU_RS00425

  • transcription-direction:
    • positive
  • centisome-position:
    • 2.5464716
  • left-end-position:
    • 97861
  • right-end-position:
    • 99501

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7111
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-5939
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6389
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5938
    • 2 reactions found over 3 reactions in the full pathway
  • VALSYN-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5103
    • 4 reactions found over 7 reactions in the full pathway
  • ILEUSYN-PWY
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-5104
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5101
    • 3 reactions found over 8 reactions in the full pathway
  • GLYCOLATEMET-PWY
    • 1 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=CPD-551&oldid=69011"