Difference between revisions of "FORMALDEHYDE"

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(Created page with "Category:gene == Gene FSU_RS03780 == * common-name: ** pgk * transcription-direction: ** negative * centisome-position: ** 22.769556 * left-end-position: ** 875035 * r...")
(Created page with "Category:gene == Gene FISUC_RS07880 == * transcription-direction: ** negative * centisome-position: ** 50.188087 * left-end-position: ** 1928545 * right-end-position:...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene FSU_RS03780 ==
+
== Gene FISUC_RS07880 ==
−
* common-name:
 
−
** pgk
 
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* centisome-position:
 
* centisome-position:
−
** 22.769556    
+
** 50.188087    
 
* left-end-position:
 
* left-end-position:
−
** 875035
+
** 1928545
 
* right-end-position:
 
* right-end-position:
−
** 876291
+
** 1929306
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[fibrobacter_final_03112020]]
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* [[fibrobacter_18032021]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PHOSGLYPHOS-RXN]]
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* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
*** source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6163]]
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* [[P185-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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** '''10''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-6416]]
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* [[PWY-1042]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[QUINATEDEG-PWY]]
−
* [[SUCSYN-PWY]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6707]]
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* [[ANAGLYCOLYSIS-PWY]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''11''' reactions found over '''11''' reactions in the full pathway
 
−
* [[CALVIN-PWY]]
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''13''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''11''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''7''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-6886]]
 
−
** '''6''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''14''' reactions found over '''15''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''17''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-8004]]
 
−
** '''8''' reactions found over '''7''' reactions in the full pathway
 
−
</div>
 
−
{{#set: common-name=pgk}}
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: centisome-position=22.769556   }}
+
{{#set: centisome-position=50.188087   }}
−
{{#set: left-end-position=875035}}
+
{{#set: left-end-position=1928545}}
−
{{#set: right-end-position=876291}}
+
{{#set: right-end-position=1929306}}
−
{{#set: organism associated=fibrobacter_final_03112020}}
+
{{#set: organism associated=fibrobacter_18032021}}
 
{{#set: nb reaction associated=1}}
 
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=15}}
+
{{#set: nb pathway associated=4}}

Revision as of 15:51, 18 March 2021

Gene FISUC_RS07880

  • transcription-direction:
    • negative
  • centisome-position:
    • 50.188087
  • left-end-position:
    • 1928545
  • right-end-position:
    • 1929306

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6163
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6416
    • 2 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6707
    • 1 reactions found over 3 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FORMALDEHYDE&oldid=69097"