Difference between revisions of "DEOXYGUANPHOSPHOR-RXN"
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(Created page with "Category:reaction == Reaction 5-AMINOLEVULINIC-ACID-SYNTHASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.37 ec-2.3.1.37] * direction: ** left-to-right == Rea...") |
(Created page with "Category:reaction == Reaction GUANPRIBOSYLTRAN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.8 ec-2.4.2.8] * direction: ** left-to-right * common-name: ** xant...") |
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[[Category:reaction]] | [[Category:reaction]] | ||
− | == Reaction | + | == Reaction GUANPRIBOSYLTRAN-RXN == |
* ec-number: | * ec-number: | ||
− | ** [http://enzyme.expasy.org/EC/2. | + | ** [http://enzyme.expasy.org/EC/2.4.2.8 ec-2.4.2.8] |
* direction: | * direction: | ||
** left-to-right | ** left-to-right | ||
+ | * common-name: | ||
+ | ** xanthine phosphoribosyltransferase | ||
+ | ** hypoxanthine phosphoribosyltransferase | ||
== Reaction formula == | == Reaction formula == | ||
− | * 1 [[ | + | * 1 [[GUANINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c] |
== Gene(s) associated with this reaction == | == Gene(s) associated with this reaction == | ||
+ | * Gene: [[FSU_RS05565]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | *** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | ||
+ | * Gene: [[FISUC_RS03675]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a | ||
+ | * Gene: [[FISUC_RS08325]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
+ | * Gene: [[FSU_RS10255]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a | ||
== Pathway(s) == | == Pathway(s) == | ||
− | * [[PWY- | + | * [[PWY-6620]], guanine and guanosine salvage: |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
− | * [[PWY- | + | * [[PWY-6599]], guanine and guanosine salvage II: |
− | ** ''' | + | ** '''2''' reactions found over '''2''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
− | * category: [[ | + | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a |
+ | * category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a | ||
+ | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a | ||
== External links == | == External links == | ||
− | |||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25427 25427] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01229 R01229] |
− | + | {{#set: ec-number=ec-2.4.2.8}} | |
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− | {{#set: ec-number=ec-2. | ||
{{#set: direction=left-to-right}} | {{#set: direction=left-to-right}} | ||
− | {{#set: nb gene associated= | + | {{#set: common-name=hypoxanthine phosphoribosyltransferase|xanthine phosphoribosyltransferase}} |
+ | {{#set: nb gene associated=4}} | ||
{{#set: nb pathway associated=2}} | {{#set: nb pathway associated=2}} | ||
− | {{#set: reconstruction category= | + | {{#set: reconstruction category=annotation|orthology}} |
− | {{#set: reconstruction tool= | + | {{#set: reconstruction tool=orthofinder|pathwaytools}} |
− | {{#set: reconstruction comment= | + | {{#set: reconstruction comment=n.a}} |
− | {{#set: reconstruction source= | + | {{#set: reconstruction source=bthetaiotaomicron|faecalibacterium|genome|ecoli|bifidobacterium|plantarum}} |
Revision as of 15:57, 18 March 2021
Contents
Reaction GUANPRIBOSYLTRAN-RXN
- ec-number:
- direction:
- left-to-right
- common-name:
- xanthine phosphoribosyltransferase
- hypoxanthine phosphoribosyltransferase
Reaction formula
Gene(s) associated with this reaction
- Gene: FSU_RS05565
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: orthology
- Source: bthetaiotaomicron, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: bifidobacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: faecalibacterium, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: ecoli, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Source: plantarum, Tool: orthofinder, Assignment: n.a, Comment: n.a
- Category: annotation
- Gene: FISUC_RS03675
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: ec-number, Comment: n.a
- Category: annotation
- Gene: FISUC_RS08325
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
- Gene: FSU_RS10255
- Category: annotation
- Source: genome, Tool: pathwaytools, Assignment: automated-name-match, Comment: n.a
- Category: annotation
Pathway(s)
- PWY-6620, guanine and guanosine salvage:
- 2 reactions found over 2 reactions in the full pathway
- PWY-6599, guanine and guanosine salvage II:
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- category: annotation; source: genome; tool: pathwaytools; comment: n.a
- category: orthology; source: plantarum; tool: orthofinder; comment: n.a
- category: orthology; source: ecoli; tool: orthofinder; comment: n.a
- category: orthology; source: faecalibacterium; tool: orthofinder; comment: n.a
- category: orthology; source: bifidobacterium; tool: orthofinder; comment: n.a
- category: orthology; source: bthetaiotaomicron; tool: orthofinder; comment: n.a
External links