Difference between revisions of "FISUC RS10855"

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(Created page with "Category:reaction == Reaction DTDPDEHYDRHAMEPIM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13] * direction: ** left-to-right * common-name: ** d...")
(Created page with "Category:reaction == Reaction SUCCORNTRANSAM-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.6.1.81 ec-2.6.1.81] * direction: ** reversible == Reaction formula == *...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction DTDPDEHYDRHAMEPIM-RXN ==
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== Reaction SUCCORNTRANSAM-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/5.1.3.13 ec-5.1.3.13]
+
** [http://enzyme.expasy.org/EC/2.6.1.81 ec-2.6.1.81]
 
* direction:
 
* direction:
−
** left-to-right
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** reversible
−
* common-name:
 
−
** dtdp-4-dehydrorhamnose 3,5-epimerase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[DTDP-DEOH-DEOXY-GLUCOSE]][c] '''=>''' 1 [[DTDP-DEOH-DEOXY-MANNOSE]][c]
+
* 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[N2-SUCCINYLORNITHINE]][c] '''<=>''' 1 [[CPD-822]][c] '''+''' 1 [[GLT]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FISUC_RS03895]]
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* Gene: [[FSU_RS13050]]
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** Category: [[annotation]]
+
** Category: [[orthology]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
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*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
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* Gene: [[FSU_RS05790]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
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* [[PWY-7301]], dTDP-4-O-demethyl-&beta;-L-noviose biosynthesis:
+
* [[AST-PWY]], L-arginine degradation II (AST pathway):
 
** '''3''' reactions found over '''5''' reactions in the full pathway
 
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-7814]], dTDP-L-daunosamine biosynthesis:
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[DTDPRHAMSYN-PWY]], dTDP-L-rhamnose biosynthesis:
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16969 16969]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16953 16953]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R06514 R06514]
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** [http://www.genome.jp/dbget-bin/www_bget?R04217 R04217]
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* UNIPROT:
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{{#set: ec-number=ec-2.6.1.81}}
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** [http://www.uniprot.org/uniprot/Q9JWX1 Q9JWX1]
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{{#set: direction=reversible}}
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** [http://www.uniprot.org/uniprot/Q9JWW7 Q9JWW7]
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{{#set: nb gene associated=1}}
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** [http://www.uniprot.org/uniprot/Q9UZG9 Q9UZG9]
+
{{#set: nb pathway associated=1}}
−
** [http://www.uniprot.org/uniprot/P37745 P37745]
+
{{#set: reconstruction category=orthology}}
−
** [http://www.uniprot.org/uniprot/Q7M0V5 Q7M0V5]
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{{#set: reconstruction tool=orthofinder}}
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** [http://www.uniprot.org/uniprot/P37763 P37763]
 
−
** [http://www.uniprot.org/uniprot/Q46770 Q46770]
 
−
** [http://www.uniprot.org/uniprot/P29783 P29783]
 
−
{{#set: ec-number=ec-5.1.3.13}}
 
−
{{#set: direction=left-to-right}}
 
−
{{#set: common-name=dtdp-4-dehydrorhamnose 3,5-epimerase}}
 
−
{{#set: nb gene associated=2}}
 
−
{{#set: nb pathway associated=3}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=ecoli}}

Revision as of 15:58, 18 March 2021

Reaction SUCCORNTRANSAM-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • AST-PWY, L-arginine degradation II (AST pathway):
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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