Difference between revisions of "FISUC RS03515"

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(Created page with "Category:reaction == Reaction 2.7.1.148-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.7.1.148 ec-2.7.1.148] * direction: ** left-to-right * common-name: ** 4-(cyti...")
(Created page with "Category:reaction == Reaction INOPHOSPHOR-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1] * direction: ** reversible == Reaction formula == * 1 I...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 2.7.1.148-RXN ==
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== Reaction INOPHOSPHOR-RXN ==
 
* ec-number:
 
* ec-number:
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** [http://enzyme.expasy.org/EC/2.7.1.148 ec-2.7.1.148]
+
** [http://enzyme.expasy.org/EC/2.4.2.1 ec-2.4.2.1]
 
* direction:
 
* direction:
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** left-to-right
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** reversible
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* common-name:
 
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** 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[4-CYTIDINE-5-DIPHOSPHO-2-C]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[2-PHOSPHO-4-CYTIDINE-5-DIPHOSPHO-2-C-MET]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
+
* 1 [[INOSINE]][c] '''+''' 1 [[Pi]][c] '''<=>''' 1 [[HYPOXANTHINE]][c] '''+''' 1 [[RIBOSE-1P]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
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* Gene: [[FSU_RS14240]]
 
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** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
−
** Category: [[orthology]]
 
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
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* Gene: [[FISUC_RS12270]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I:
+
* [[PWY-6609]], adenine and adenosine salvage III:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7560]], methylerythritol phosphate pathway II:
+
* [[PWY0-1296]], purine ribonucleosides degradation:
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
 +
* [[SALVADEHYPOX-PWY]], adenosine nucleotides degradation II:
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[manual]]; source: [[reactions_add_fva_test3]]; tool: [[curation]]; comment: reaction of pwy-6609
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18438 18438]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=27649 27649]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R05634 R05634]
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** [http://www.genome.jp/dbget-bin/www_bget?R01863 R01863]
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{{#set: ec-number=ec-2.7.1.148}}
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{{#set: ec-number=ec-2.4.2.1}}
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{{#set: direction=left-to-right}}
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{{#set: direction=reversible}}
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{{#set: common-name=4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase}}
+
{{#set: nb gene associated=0}}
−
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: nb pathway associated=2}}
+
{{#set: reconstruction category=manual}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction tool=curation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
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{{#set: reconstruction comment=reaction of pwy-6609}}
−
{{#set: reconstruction comment=n.a}}
+
{{#set: reconstruction source=reactions_add_fva_test3}}
−
{{#set: reconstruction source=bifidobacterium|genome|plantarum|faecalibacterium|bthetaiotaomicron|ecoli}}
 

Revision as of 15:58, 18 March 2021

Reaction INOPHOSPHOR-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6609, adenine and adenosine salvage III:
    • 4 reactions found over 4 reactions in the full pathway
  • PWY0-1296, purine ribonucleosides degradation:
    • 6 reactions found over 6 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II:
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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