Difference between revisions of "FSU RS04640"

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(Created page with "Category:reaction == Reaction 4.2.99.18-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.2.99.18 ec-4.2.99.18] * direction: ** left-to-right * common-name: ** endonuc...")
(Created page with "Category:reaction == Reaction 3.1.4.44-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.1.4.44 ec-3.1.4.44] * direction: ** left-to-right == Reaction formula == * 1 [...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction 4.2.99.18-RXN ==
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== Reaction 3.1.4.44-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/4.2.99.18 ec-4.2.99.18]
+
** [http://enzyme.expasy.org/EC/3.1.4.44 ec-3.1.4.44]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** endonuclease iii
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[DNA-containing-abasic-Sites]][c] '''=>''' 1 [[3-terminal-unsaturated-sugars]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[PROTON]][c]
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* 1 [[CPD-541]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLYCEROL-3P]][c] '''+''' 1 [[MYO-INOSITOL]][c] '''+''' 1 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS02105]]
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* Gene: [[FSU_RS06790]]
** Category: [[annotation]]
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** Category: [[orthology]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
* Gene: [[FSU_RS03985]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
* UNIPROT:
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* RHEA:
** [http://www.uniprot.org/uniprot/P0AB83 P0AB83]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16502 16502]
** [http://www.uniprot.org/uniprot/P28352 P28352]
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* LIGAND-RXN:
** [http://www.uniprot.org/uniprot/Q58829 Q58829]
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** [http://www.genome.jp/dbget-bin/www_bget?R01193 R01193]
** [http://www.uniprot.org/uniprot/Q9PHS1 Q9PHS1]
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{{#set: ec-number=ec-3.1.4.44}}
** [http://www.uniprot.org/uniprot/Q9JVT0 Q9JVT0]
 
** [http://www.uniprot.org/uniprot/Q9PNL1 Q9PNL1]
 
** [http://www.uniprot.org/uniprot/P44319 P44319]
 
** [http://www.uniprot.org/uniprot/Q9CGM5 Q9CGM5]
 
** [http://www.uniprot.org/uniprot/P04418 P04418]
 
** [http://www.uniprot.org/uniprot/P27695 P27695]
 
** [http://www.uniprot.org/uniprot/P23196 P23196]
 
** [http://www.uniprot.org/uniprot/P22936 P22936]
 
** [http://www.uniprot.org/uniprot/P43138 P43138]
 
** [http://www.uniprot.org/uniprot/P95945 P95945]
 
** [http://www.uniprot.org/uniprot/P50525 P50525]
 
{{#set: ec-number=ec-4.2.99.18}}
 
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=endonuclease iii}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
 
 
{{#set: nb pathway associated=0}}
 
{{#set: nb pathway associated=0}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction tool=orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=plantarum}}

Revision as of 15:59, 18 March 2021

Reaction 3.1.4.44-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

Reconstruction information

External links