Difference between revisions of "FSU RS07260"

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(Created page with "Category:reaction == Reaction RXN-16401 == * ec-number: ** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3] * direction: ** left-to-right * common-name: ** long-chain fatt...")
(Created page with "Category:reaction == Reaction AMINOBUTDEHYDROG-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.2.1.19 ec-1.2.1.19] * direction: ** left-to-right == Reaction formula...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction RXN-16401 ==
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== Reaction AMINOBUTDEHYDROG-RXN ==
 
* ec-number:
 
* ec-number:
** [http://enzyme.expasy.org/EC/6.2.1.3 ec-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.2.1.19 ec-1.2.1.19]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
* common-name:
 
** long-chain fatty acid--coa ligase
 
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17640]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[CPD-17641]][c] '''+''' 1 [[PPI]][c]
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* 1 [[4-AMINO-BUTYRALDEHYDE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[4-AMINO-BUTYRATE]][c] '''+''' 1 [[NADH]][c] '''+''' 2 [[PROTON]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FISUC_RS12045]]
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* Gene: [[FSU_RS01755]]
** Category: [[annotation]]
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** Category: [[manual]]
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** Source: [[reactions_add_43_emile_ortho_meta]], Tool: [[unknown-tool]], Assignment: n.a, Comment: present in the orthology part of the emile network.
* Gene: [[FSU_RS14015]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
* [[PWY-6733]], sporopollenin precursors biosynthesis:
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* [[PWY-2]], putrescine degradation IV:
** '''4''' reactions found over '''18''' reactions in the full pathway
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** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-3]], putrescine degradation V:
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PUTDEG-PWY]], putrescine degradation I:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* category: [[manual]]; source: [[reactions_add_43_emile_ortho_meta]]; tool: [[curation]]; comment: present in the orthology part of the emile network.
 
== External links  ==
 
== External links  ==
{{#set: ec-number=ec-6.2.1.3}}
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* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19106 19106]
 +
* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02549 R02549]
 +
* UNIPROT:
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** [http://www.uniprot.org/uniprot/P49189 P49189]
 +
{{#set: ec-number=ec-1.2.1.19}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
{{#set: common-name=long-chain fatty acid--coa ligase}}
+
{{#set: nb gene associated=1}}
{{#set: nb gene associated=2}}
+
{{#set: nb pathway associated=3}}
{{#set: nb pathway associated=1}}
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{{#set: reconstruction category=manual}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction tool=curation}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction comment=present in the orthology part of the emile network.}}
{{#set: reconstruction comment=n.a}}
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{{#set: reconstruction source=reactions_add_43_emile_ortho_meta}}
{{#set: reconstruction source=genome}}
 

Revision as of 16:01, 18 March 2021

Reaction AMINOBUTDEHYDROG-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-2, putrescine degradation IV:
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-3, putrescine degradation V:
    • 1 reactions found over 2 reactions in the full pathway
  • PUTDEG-PWY, putrescine degradation I:
    • 2 reactions found over 2 reactions in the full pathway

Reconstruction information

External links