Difference between revisions of "FISUC RS13965"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:reaction == Reaction 3.4.13.22-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.4.13.22 ec-3.4.13.22] * direction: ** left-to-right == Reaction formula == *...")
(Created page with "Category:reaction == Reaction PYRUVFORMLY-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.3.1.54 ec-2.3.1.54] * direction: ** reversible * common-name: ** formate c-...")
Line 1: Line 1:
 
[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction 3.4.13.22-RXN ==
+
== Reaction PYRUVFORMLY-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.4.13.22 ec-3.4.13.22]
+
** [http://enzyme.expasy.org/EC/2.3.1.54 ec-2.3.1.54]
 
* direction:
 
* direction:
−
** left-to-right
+
** reversible
 +
* common-name:
 +
** formate c-acetyltransferase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[D-ALA-D-ALA]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[D-ALANINE]][c]
+
* 1 [[ACETYL-COA]][c] '''+''' 1 [[FORMATE]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[PYRUVATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS03955]]
+
* Gene: [[FISUC_RS05215]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS07120]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
* Gene: [[FSU_RS07105]]
 +
** Category: [[annotation]]
 +
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
** Category: [[orthology]]
 +
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 +
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6454]], vancomycin resistance I:
+
* [[FERMENTATION-PWY]], mixed acid fermentation:
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''14''' reactions found over '''16''' reactions in the full pathway
−
* [[PWY-6455]], vancomycin resistance II:
+
* [[PWY-5480]], pyruvate fermentation to ethanol I:
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5493]], reductive monocarboxylic acid cycle:
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5485]], pyruvate fermentation to acetate IV:
 +
** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4LZ-257]], superpathway of fermentation (Chlamydomonas reinhardtii):
 +
** '''9''' reactions found over '''7''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 +
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 +
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20662 20662]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11847 11847]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R07651 R07651]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00212 R00212]
−
{{#set: ec-number=ec-3.4.13.22}}
+
* UNIPROT:
−
{{#set: direction=left-to-right}}
+
** [http://www.uniprot.org/uniprot/P32674 P32674]
−
{{#set: nb gene associated=1}}
+
** [http://www.uniprot.org/uniprot/O26446 O26446]
−
{{#set: nb pathway associated=2}}
+
** [http://www.uniprot.org/uniprot/P75793 P75793]
−
{{#set: reconstruction category=orthology}}
+
** [http://www.uniprot.org/uniprot/P42632 P42632]
−
{{#set: reconstruction tool=orthofinder}}
+
** [http://www.uniprot.org/uniprot/O28823 O28823]
 +
** [http://www.uniprot.org/uniprot/O32797 O32797]
 +
** [http://www.uniprot.org/uniprot/Q46266 Q46266]
 +
** [http://www.uniprot.org/uniprot/P09373 P09373]
 +
** [http://www.uniprot.org/uniprot/P37836 P37836]
 +
{{#set: ec-number=ec-2.3.1.54}}
 +
{{#set: direction=reversible}}
 +
{{#set: common-name=formate c-acetyltransferase}}
 +
{{#set: nb gene associated=3}}
 +
{{#set: nb pathway associated=5}}
 +
{{#set: reconstruction category=annotation|orthology}}
 +
{{#set: reconstruction tool=pathwaytools|orthofinder}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=ecoli}}
+
{{#set: reconstruction source=bthetaiotaomicron|faecalibacterium|genome|ecoli|bifidobacterium|plantarum}}

Revision as of 16:01, 18 March 2021

Reaction PYRUVFORMLY-RXN

  • ec-number:
  • direction:
    • reversible
  • common-name:
    • formate c-acetyltransferase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • FERMENTATION-PWY, mixed acid fermentation:
    • 14 reactions found over 16 reactions in the full pathway
  • PWY-5480, pyruvate fermentation to ethanol I:
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5493, reductive monocarboxylic acid cycle:
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5485, pyruvate fermentation to acetate IV:
    • 4 reactions found over 3 reactions in the full pathway
  • PWY4LZ-257, superpathway of fermentation (Chlamydomonas reinhardtii):
    • 9 reactions found over 7 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS13965&oldid=73072"