Difference between revisions of "DEOXYGUANPHOSPHOR-RXN"

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(Created page with "Category:reaction == Reaction GUANPRIBOSYLTRAN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/2.4.2.8 ec-2.4.2.8] * direction: ** left-to-right * common-name: ** xant...")
(Created page with "Category:reaction == Reaction FGAMSYN-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3] * direction: ** left-to-right * common-name: ** phosphoribosy...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction GUANPRIBOSYLTRAN-RXN ==
+
== Reaction FGAMSYN-RXN ==
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/2.4.2.8 ec-2.4.2.8]
+
** [http://enzyme.expasy.org/EC/6.3.5.3 ec-6.3.5.3]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 
* common-name:
 
* common-name:
−
** xanthine phosphoribosyltransferase
+
** phosphoribosylformylglycinamidine synthase
−
** hypoxanthine phosphoribosyltransferase
 
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[GUANINE]][c] '''+''' 1 [[PRPP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[PPI]][c]
+
* 1 [[5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS05565]]
+
* Gene: [[FSU_RS01705]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
** Category: [[orthology]]
+
* Gene: [[FISUC_RS15510]]
−
*** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
*** Source: [[plantarum]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
−
* Gene: [[FISUC_RS03675]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS08325]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
−
* Gene: [[FSU_RS10255]]
 
−
** Category: [[annotation]]
 
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-6620]], guanine and guanosine salvage:
+
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6599]], guanine and guanosine salvage II:
+
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II:
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
 +
** '''7''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
−
* category: [[orthology]]; source: [[plantarum]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
−
* category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25427 25427]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01229 R01229]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463]
−
{{#set: ec-number=ec-2.4.2.8}}
+
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/O67691 O67691]
 +
** [http://www.uniprot.org/uniprot/Q9UXW5 Q9UXW5]
 +
** [http://www.uniprot.org/uniprot/Q9PNY0 Q9PNY0]
 +
** [http://www.uniprot.org/uniprot/O28339 O28339]
 +
** [http://www.uniprot.org/uniprot/Q9PHZ7 Q9PHZ7]
 +
** [http://www.uniprot.org/uniprot/O26270 O26270]
 +
** [http://www.uniprot.org/uniprot/Q59042 Q59042]
 +
** [http://www.uniprot.org/uniprot/Q58660 Q58660]
 +
** [http://www.uniprot.org/uniprot/O27427 O27427]
 +
** [http://www.uniprot.org/uniprot/Q9JWC5 Q9JWC5]
 +
** [http://www.uniprot.org/uniprot/P35852 P35852]
 +
** [http://www.uniprot.org/uniprot/P38972 P38972]
 +
** [http://www.uniprot.org/uniprot/Q55843 Q55843]
 +
** [http://www.uniprot.org/uniprot/Q55037 Q55037]
 +
** [http://www.uniprot.org/uniprot/P12041 P12041]
 +
** [http://www.uniprot.org/uniprot/P12042 P12042]
 +
** [http://www.uniprot.org/uniprot/P15254 P15254]
 +
** [http://www.uniprot.org/uniprot/O14228 O14228]
 +
** [http://www.uniprot.org/uniprot/P35421 P35421]
 +
** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07]
 +
** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06]
 +
</div>
 +
{{#set: ec-number=ec-6.3.5.3}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: common-name=hypoxanthine phosphoribosyltransferase|xanthine phosphoribosyltransferase}}
+
{{#set: common-name=phosphoribosylformylglycinamidine synthase}}
−
{{#set: nb gene associated=4}}
+
{{#set: nb gene associated=2}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=3}}
−
{{#set: reconstruction category=annotation|orthology}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction tool=orthofinder|pathwaytools}}
+
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=bthetaiotaomicron|faecalibacterium|genome|ecoli|bifidobacterium|plantarum}}
+
{{#set: reconstruction source=genome}}

Revision as of 18:07, 26 April 2021

Reaction FGAMSYN-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • phosphoribosylformylglycinamidine synthase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II:
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis:
    • 7 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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