Difference between revisions of "FSU RS00290"

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(Created page with "Category:reaction == Reaction ACYLCOASYN-RXN == * common-name: ** 2,3,4-saturated fatty acyl-coa synthetase ** long-chain fatty acid--coa ligase * ec-number: ** [http://en...")
(Created page with "Category:gene == Gene FISUC_RS04275 == * common-name: ** gyrb * transcription-direction: ** positive * centisome-position: ** 27.501934 * left-end-position: ** 1056799...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction ACYLCOASYN-RXN ==
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== Gene FISUC_RS04275 ==
 
* common-name:
 
* common-name:
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** 2,3,4-saturated fatty acyl-coa synthetase
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** gyrb
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** long-chain fatty acid--coa ligase
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* transcription-direction:
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* ec-number:
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** positive
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** [http://enzyme.expasy.org/EC/6.2.1 ec-6.2.1]
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* centisome-position:
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* direction:
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** 27.501934   
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** left-to-right
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* left-end-position:
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* synonymous:
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** 1056799
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** fatty acid thiokinase (long-chain)
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* right-end-position:
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** acyl-activating enzyme
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** 1058739
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== Reaction formula ==
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== Organism(s) associated with this gene  ==
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* 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[CPD66-39]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c]
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* [[fibrobacter_23042021]]
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== Gene(s) associated with this reaction  ==
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== Reaction(s) associated ==
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* Gene: [[FISUC_RS12045]]
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* [[5.99.1.2-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* Gene: [[FSU_RS14015]]
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{{#set: common-name=gyrb}}
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** Category: [[annotation]]
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{{#set: transcription-direction=positive}}
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*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: automated-name-match, Comment: n.a
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{{#set: centisome-position=27.501934    }}
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== Pathway(s)  ==
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{{#set: left-end-position=1056799}}
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* [[FAO-PWY]], fatty acid β-oxidation I:
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{{#set: right-end-position=1058739}}
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** '''2''' reactions found over '''7''' reactions in the full pathway
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{{#set: organism associated=fibrobacter_23042021}}
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* [[PWY-5136]], fatty acid β-oxidation II (peroxisome):
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{{#set: nb reaction associated=1}}
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** '''1''' reactions found over '''5''' reactions in the full pathway
 
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* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome):
 
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** '''1''' reactions found over '''7''' reactions in the full pathway
 
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* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast):
 
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** '''1''' reactions found over '''5''' reactions in the full pathway
 
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== Reconstruction information  ==
 
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* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
 
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== External links  ==
 
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
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* UNIPROT:
 
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** [http://www.uniprot.org/uniprot/P18163 P18163]
 
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** [http://www.uniprot.org/uniprot/P39518 P39518]
 
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** [http://www.uniprot.org/uniprot/O51162 O51162]
 
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** [http://www.uniprot.org/uniprot/P39002 P39002]
 
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** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
 
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** [http://www.uniprot.org/uniprot/Q10776 Q10776]
 
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** [http://www.uniprot.org/uniprot/O83181 O83181]
 
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** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
 
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** [http://www.uniprot.org/uniprot/P94547 P94547]
 
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** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
 
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** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
 
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** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
 
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** [http://www.uniprot.org/uniprot/P44446 P44446]
 
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** [http://www.uniprot.org/uniprot/O30039 O30039]
 
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** [http://www.uniprot.org/uniprot/O51539 O51539]
 
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** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
 
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** [http://www.uniprot.org/uniprot/P33121 P33121]
 
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** [http://www.uniprot.org/uniprot/P33124 P33124]
 
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** [http://www.uniprot.org/uniprot/P30624 P30624]
 
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** [http://www.uniprot.org/uniprot/Q02602 Q02602]
 
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** [http://www.uniprot.org/uniprot/P69451 P69451]
 
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** [http://www.uniprot.org/uniprot/P69452 P69452]
 
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** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
 
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** [http://www.uniprot.org/uniprot/P47912 P47912]
 
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** [http://www.uniprot.org/uniprot/P73004 P73004]
 
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** [http://www.uniprot.org/uniprot/O81614 O81614]
 
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** [http://www.uniprot.org/uniprot/O15840 O15840]
 
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** [http://www.uniprot.org/uniprot/Q96537 Q96537]
 
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** [http://www.uniprot.org/uniprot/Q96538 Q96538]
 
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** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 
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** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 
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** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 
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** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 
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** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 
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** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 
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** [http://www.uniprot.org/uniprot/O60135 O60135]
 
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</div>
 
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{{#set: common-name=2,3,4-saturated fatty acyl-coa synthetase|long-chain fatty acid--coa ligase}}
 
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{{#set: ec-number=ec-6.2.1}}
 
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{{#set: direction=left-to-right}}
 
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{{#set: synonymous=acyl-activating enzyme|fatty acid thiokinase (long-chain)}}
 
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{{#set: nb gene associated=2}}
 
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{{#set: nb pathway associated=4}}
 
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{{#set: reconstruction category=annotation}}
 
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{{#set: reconstruction tool=pathwaytools}}
 
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{{#set: reconstruction comment=n.a}}
 
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{{#set: reconstruction source=genome}}
 

Revision as of 18:10, 26 April 2021

Gene FISUC_RS04275

  • common-name:
    • gyrb
  • transcription-direction:
    • positive
  • centisome-position:
    • 27.501934
  • left-end-position:
    • 1056799
  • right-end-position:
    • 1058739

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FSU_RS00290&oldid=78151"