Difference between revisions of "FISUC RS03085"

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(Created page with "Category:reaction == Reaction R10-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43] * direction: ** reversible == Reaction formula == * 1 [[CPD-26]...")
(Created page with "Category:gene == Gene FISUC_RS03930 == * transcription-direction: ** positive * centisome-position: ** 24.787157 * left-end-position: ** 952480 * right-end-position: *...")
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[[Category:reaction]]
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[[Category:gene]]
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== Reaction R10-RXN ==
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== Gene FISUC_RS03930 ==
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* ec-number:
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* transcription-direction:
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** [http://enzyme.expasy.org/EC/4.1.2.43 ec-4.1.2.43]
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** positive
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* direction:
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* centisome-position:
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** reversible
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** 24.787157   
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== Reaction formula ==
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* left-end-position:
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* 1 [[CPD-26]][c] '''<=>''' 1 [[FORMALDEHYDE]][c] '''+''' 1 [[RIBULOSE-5P]][c]
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** 952480
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== Gene(s) associated with this reaction ==
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* right-end-position:
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== Pathway(s) ==
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** 954210
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* [[PWY-1861]], formaldehyde assimilation II (assimilatory RuMP Cycle):
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== Organism(s) associated with this gene ==
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[fibrobacter_23042021]]
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* [[PWY-7796]], pentose phosphate pathway (oxidative branch) II:
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== Reaction(s) associated ==
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[RXN-12752]]
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* [[RUMP-PWY]], formaldehyde oxidation I:
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** Category: [[annotation]]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reconstruction information  ==
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* [[RXN-13141]]
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* category: [[manual]]; source: [[reactions_add_ibrahim_26082020]]; tool: [[curation]]; comment: added to improve flux in sugars
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** Category: [[annotation]]
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== External links  ==
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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* RHEA:
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* [[RXN-13142]]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=25204 25204]
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** Category: [[annotation]]
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* LIGAND-RXN:
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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** [http://www.genome.jp/dbget-bin/www_bget?R05338 R05338]
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* [[RXN0-6727]]
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{{#set: ec-number=ec-4.1.2.43}}
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** Category: [[annotation]]
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{{#set: direction=reversible}}
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*** source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb gene associated=0}}
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== Pathway(s) associated ==
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{{#set: nb pathway associated=3}}
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* [[PWY-6938]]
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{{#set: reconstruction category=manual}}
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** '''3''' reactions found over '''4''' reactions in the full pathway
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{{#set: reconstruction tool=curation}}
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{{#set: transcription-direction=positive}}
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{{#set: reconstruction comment=added to improve flux in sugars}}
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{{#set: centisome-position=24.787157    }}
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{{#set: reconstruction source=reactions_add_ibrahim_26082020}}
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{{#set: left-end-position=952480}}
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{{#set: right-end-position=954210}}
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{{#set: organism associated=fibrobacter_23042021}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=1}}

Revision as of 18:11, 26 April 2021

Gene FISUC_RS03930

  • transcription-direction:
    • positive
  • centisome-position:
    • 24.787157
  • left-end-position:
    • 952480
  • right-end-position:
    • 954210

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6938
    • 3 reactions found over 4 reactions in the full pathway




Retrieved from "http://gem-aureme.genouest.org//fsucgem/index.php?title=FISUC_RS03085&oldid=78499"