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| | [[Category:reaction]] | | [[Category:reaction]] |
| − | == Reaction 3-ISOPROPYLMALISOM-RXN == | + | == Reaction TRANS-RXN-1 == |
| − | * common-name:
| |
| − | ** 3-isopropylmalate dehydratase
| |
| | * direction: | | * direction: |
| | ** reversible | | ** reversible |
| − | * synonymous:
| |
| − | ** β-isopropylmalate dehydratase
| |
| − | ** α-isopropylmalate isomerase
| |
| − | ** 3-isopropylmalate hydro-lyase
| |
| − | ** (2r,3s)-3-isopropylmalate hydro-lyase
| |
| | == Reaction formula == | | == Reaction formula == |
| − | * 1 [[CPD-9451]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-CARBOXY-3-HYDROXY-ISOCAPROATE]][c] | + | * 1 [[FORMATE]][c] '''<=>''' 1 [[FORMATE]][e] |
| | == Gene(s) associated with this reaction == | | == Gene(s) associated with this reaction == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| + | * Gene: [[FSU_RS00935]] |
| − | * Gene: [[FISUC_RS00345]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[FISUC_RS00340]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | * Gene: [[FSU_RS02215]] | |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| | ** Category: [[orthology]] | | ** Category: [[orthology]] |
| − | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a | | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a |
| − | * Gene: [[FSU_RS02210]]
| |
| − | ** Category: [[annotation]]
| |
| − | *** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
| |
| − | ** Category: [[orthology]]
| |
| − | *** Source: [[bthetaiotaomicron]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[faecalibacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | *** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
| |
| − | </div>
| |
| | == Pathway(s) == | | == Pathway(s) == |
| − | * [[PWY-6871]], 3-methylbutanol biosynthesis (engineered):
| |
| − | ** '''6''' reactions found over '''7''' reactions in the full pathway
| |
| − | * [[LEUSYN-PWY]], L-leucine biosynthesis:
| |
| − | ** '''6''' reactions found over '''6''' reactions in the full pathway
| |
| | == Reconstruction information == | | == Reconstruction information == |
| − | * category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[bthetaiotaomicron]]; tool: [[orthofinder]]; comment: n.a
| |
| − | * category: [[orthology]]; source: [[faecalibacterium]]; tool: [[orthofinder]]; comment: n.a
| |
| | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a | | * category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a |
| − | * category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
| |
| | == External links == | | == External links == |
| − | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
| |
| − | * RHEA:
| |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16296 16296]
| |
| − | * LIGAND-RXN:
| |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03968 R03968]
| |
| − | * UNIPROT:
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PLW1 Q9PLW1]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JU82 Q9JU82]
| |
| − | ** [http://www.uniprot.org/uniprot/P80858 P80858]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9UZ07 Q9UZ07]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9JU81 Q9JU81]
| |
| − | ** [http://www.uniprot.org/uniprot/Q58673 Q58673]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02144 Q02144]
| |
| − | ** [http://www.uniprot.org/uniprot/P44968 P44968]
| |
| − | ** [http://www.uniprot.org/uniprot/Q58667 Q58667]
| |
| − | ** [http://www.uniprot.org/uniprot/P44438 P44438]
| |
| − | ** [http://www.uniprot.org/uniprot/P0A6A6 P0A6A6]
| |
| − | ** [http://www.uniprot.org/uniprot/Q9PLW2 Q9PLW2]
| |
| − | ** [http://www.uniprot.org/uniprot/Q44022 Q44022]
| |
| − | ** [http://www.uniprot.org/uniprot/Q44023 Q44023]
| |
| − | ** [http://www.uniprot.org/uniprot/Q44427 Q44427]
| |
| − | ** [http://www.uniprot.org/uniprot/P17279 P17279]
| |
| − | ** [http://www.uniprot.org/uniprot/P04787 P04787]
| |
| − | ** [http://www.uniprot.org/uniprot/P15717 P15717]
| |
| − | ** [http://www.uniprot.org/uniprot/P18250 P18250]
| |
| − | ** [http://www.uniprot.org/uniprot/Q02142 Q02142]
| |
| − | ** [http://www.uniprot.org/uniprot/P30126 P30126]
| |
| − | ** [http://www.uniprot.org/uniprot/P50181 P50181]
| |
| − | ** [http://www.uniprot.org/uniprot/P07264 P07264]
| |
| − | ** [http://www.uniprot.org/uniprot/P74207 P74207]
| |
| − | ** [http://www.uniprot.org/uniprot/O86534 O86534]
| |
| − | ** [http://www.uniprot.org/uniprot/O86535 O86535]
| |
| − | </div>
| |
| − | {{#set: common-name=3-isopropylmalate dehydratase}}
| |
| | {{#set: direction=reversible}} | | {{#set: direction=reversible}} |
| − | {{#set: synonymous=β-isopropylmalate dehydratase|α-isopropylmalate isomerase|3-isopropylmalate hydro-lyase|(2r,3s)-3-isopropylmalate hydro-lyase}}
| + | {{#set: nb gene associated=1}} |
| − | {{#set: nb gene associated=4}} | + | {{#set: nb pathway associated=0}} |
| − | {{#set: nb pathway associated=2}} | + | {{#set: reconstruction category=orthology}} |
| − | {{#set: reconstruction category=orthology|annotation}} | + | {{#set: reconstruction tool=orthofinder}} |
| − | {{#set: reconstruction tool=pathwaytools|orthofinder}} | |
| | {{#set: reconstruction comment=n.a}} | | {{#set: reconstruction comment=n.a}} |
| − | {{#set: reconstruction source=bthetaiotaomicron|genome|faecalibacterium|bifidobacterium|ecoli}} | + | {{#set: reconstruction source=ecoli}} |
