Difference between revisions of "ASPAMINOTRANS-RXN"

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(Created page with "Category:reaction == Reaction TRANS-RXN-118 == * common-name: ** l-proline:na+ symport * direction: ** reversible == Reaction formula == * 1 NA+[e] '''+''' 1 PRO[e...")
(Created page with "Category:reaction == Reaction IMIDAZOLONEPROPIONASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/3.5.2.7 ec-3.5.2.7] * direction: ** left-to-right == Reaction formu...")
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[[Category:reaction]]
 
[[Category:reaction]]
== Reaction TRANS-RXN-118 ==
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== Reaction IMIDAZOLONEPROPIONASE-RXN ==
* common-name:
+
* ec-number:
** l-proline:na+ symport
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** [http://enzyme.expasy.org/EC/3.5.2.7 ec-3.5.2.7]
 
* direction:
 
* direction:
** reversible
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** left-to-right
 
== Reaction formula ==
 
== Reaction formula ==
* 1 [[NA+]][e] '''+''' 1 [[PRO]][e] '''<=>''' 1 [[NA+]][c] '''+''' 1 [[PRO]][c]
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* 1 [[4-IMIDAZOLONE-5-PROPIONATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[N-FORMIMINO-L-GLUTAMATE]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
* Gene: [[FSU_RS12560]]
 
** Category: [[orthology]]
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
*** Source: [[ecoli]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
* Gene: [[FSU_RS07485]]
 
** Category: [[orthology]]
 
*** Source: [[bifidobacterium]], Tool: [[orthofinder]], Assignment: n.a, Comment: n.a
 
 
== Pathway(s)  ==
 
== Pathway(s)  ==
 +
* [[HISDEG-PWY]], L-histidine degradation I:
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5030]], L-histidine degradation III:
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[HISHP-PWY]], L-histidine degradation VI:
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** '''3''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5028]], L-histidine degradation II:
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** '''5''' reactions found over '''5''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* category: [[orthology]]; source: [[ecoli]]; tool: [[orthofinder]]; comment: n.a
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* category: [[manual]]; source: [[add_expert_reactions]]; tool: [[curation]]; comment: to improve flux in glycogen
* category: [[orthology]]; source: [[bifidobacterium]]; tool: [[orthofinder]]; comment: n.a
 
 
== External links  ==
 
== External links  ==
{{#set: common-name=l-proline:na+ symport}}
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* RHEA:
{{#set: direction=reversible}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23663 23663]
{{#set: nb gene associated=2}}
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* LIGAND-RXN:
{{#set: nb pathway associated=0}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02288 R02288]
{{#set: reconstruction category=orthology}}
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{{#set: ec-number=ec-3.5.2.7}}
{{#set: reconstruction tool=orthofinder}}
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{{#set: direction=left-to-right}}
{{#set: reconstruction comment=n.a}}
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{{#set: nb gene associated=0}}
{{#set: reconstruction source=bifidobacterium|ecoli}}
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{{#set: nb pathway associated=4}}
 +
{{#set: reconstruction category=manual}}
 +
{{#set: reconstruction tool=curation}}
 +
{{#set: reconstruction comment=to improve flux in glycogen}}
 +
{{#set: reconstruction source=add_expert_reactions}}

Revision as of 17:06, 14 October 2022

Reaction IMIDAZOLONEPROPIONASE-RXN

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • HISDEG-PWY, L-histidine degradation I:
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-5030, L-histidine degradation III:
    • 4 reactions found over 6 reactions in the full pathway
  • HISHP-PWY, L-histidine degradation VI:
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5028, L-histidine degradation II:
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links