Difference between revisions of "5-AMINOLEVULINIC-ACID-SYNTHASE-RXN"

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(Created page with "Category:reaction == Reaction RXN-12625 == * common-name: ** n,n'-diacetylchitobiose β-n-acetylglucosaminidase ** beta-n-acetylhexosaminidase * ec-number: ** [http://...")
(Created page with "Category:reaction == Reaction NITROGENASE-RXN == * ec-number: ** [http://enzyme.expasy.org/EC/1.18.6.1 ec-1.18.6.1] * direction: ** left-to-right * common-name: ** nitroge...")
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[[Category:reaction]]
 
[[Category:reaction]]
−
== Reaction RXN-12625 ==
+
== Reaction NITROGENASE-RXN ==
−
* common-name:
 
−
** n,n'-diacetylchitobiose β-n-acetylglucosaminidase
 
−
** beta-n-acetylhexosaminidase
 
 
* ec-number:
 
* ec-number:
−
** [http://enzyme.expasy.org/EC/3.2.1.52 ec-3.2.1.52]
+
** [http://enzyme.expasy.org/EC/1.18.6.1 ec-1.18.6.1]
 
* direction:
 
* direction:
 
** left-to-right
 
** left-to-right
 +
* common-name:
 +
** nitrogenase iron protein
 +
** nitrogenase
 
== Reaction formula ==
 
== Reaction formula ==
−
* 1 [[CHITOBIOSE]][c] '''+''' 1 [[WATER]][c] '''=>''' 2 [[N-acetyl-D-glucosamine]][c]
+
* 16 [[ATP]][c] '''+''' 1 [[NITROGEN-MOLECULE]][c] '''+''' 8 [[Reduced-ferredoxins]][c] '''+''' 16 [[WATER]][c] '''=>''' 16 [[ADP]][c] '''+''' 2 [[AMMONIUM]][c] '''+''' 1 [[HYDROGEN-MOLECULE]][c] '''+''' 8 [[Oxidized-ferredoxins]][c] '''+''' 6 [[PROTON]][c] '''+''' 16 [[Pi]][c]
 
== Gene(s) associated with this reaction  ==
 
== Gene(s) associated with this reaction  ==
−
* Gene: [[FSU_RS10685]]
+
* Gene: [[FISUC_RS05430]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS07260]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS07325]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FSU_RS07330]]
 +
** Category: [[annotation]]
 +
*** Source: [[fibrobacter_succinogenes1]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 +
* Gene: [[FISUC_RS05365]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
−
* Gene: [[FISUC_RS08745]]
+
* Gene: [[FISUC_RS05425]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
−
*** Source: [[genome]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
+
*** Source: [[fibrobacter_succinogenes2]], Tool: [[pathwaytools]], Assignment: ec-number, Comment: n.a
 
== Pathway(s)  ==
 
== Pathway(s)  ==
−
* [[PWY-7822]], chitin degradation III (Serratia):
+
* [[N2FIX-PWY]], nitrogen fixation I (ferredoxin):
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY-6902]], chitin degradation II (Vibrio):
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* category: [[annotation]]; source: [[genome]]; tool: [[pathwaytools]]; comment: n.a
+
* category: [[annotation]]; source: [[fibrobacter_succinogenes2]]; tool: [[pathwaytools]]; comment: n.a
 +
* category: [[annotation]]; source: [[fibrobacter_succinogenes1]]; tool: [[pathwaytools]]; comment: n.a
 
== External links  ==
 
== External links  ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00022 R00022]
+
** [http://www.genome.jp/dbget-bin/www_bget?R05185 R05185]
−
* RHEA:
+
* UNIPROT:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30674 30674]
+
** [http://www.uniprot.org/uniprot/P06118 P06118]
−
{{#set: common-name=beta-n-acetylhexosaminidase|n,n'-diacetylchitobiose &beta;-n-acetylglucosaminidase}}
+
** [http://www.uniprot.org/uniprot/P06661 P06661]
−
{{#set: ec-number=ec-3.2.1.52}}
+
** [http://www.uniprot.org/uniprot/P26250 P26250]
 +
** [http://www.uniprot.org/uniprot/P16269 P16269]
 +
** [http://www.uniprot.org/uniprot/P15335 P15335]
 +
** [http://www.uniprot.org/uniprot/Q44563 Q44563]
 +
** [http://www.uniprot.org/uniprot/Q47885 Q47885]
 +
** [http://www.uniprot.org/uniprot/P26254 P26254]
 +
** [http://www.uniprot.org/uniprot/P26252 P26252]
 +
** [http://www.uniprot.org/uniprot/Q44121 Q44121]
 +
** [http://www.uniprot.org/uniprot/Q44485 Q44485]
 +
** [http://www.uniprot.org/uniprot/P71156 P71156]
 +
** [http://www.uniprot.org/uniprot/P08717 P08717]
 +
** [http://www.uniprot.org/uniprot/P16266 P16266]
 +
** [http://www.uniprot.org/uniprot/Q57302 Q57302]
 +
** [http://www.uniprot.org/uniprot/P26251 P26251]
 +
** [http://www.uniprot.org/uniprot/Q04028 Q04028]
 +
** [http://www.uniprot.org/uniprot/P12781 P12781]
 +
** [http://www.uniprot.org/uniprot/P16268 P16268]
 +
** [http://www.uniprot.org/uniprot/P16855 P16855]
 +
** [http://www.uniprot.org/uniprot/Q53179 Q53179]
 +
** [http://www.uniprot.org/uniprot/P16267 P16267]
 +
** [http://www.uniprot.org/uniprot/P16857 P16857]
 +
** [http://www.uniprot.org/uniprot/P16856 P16856]
 +
** [http://www.uniprot.org/uniprot/O26739 O26739]
 +
** [http://www.uniprot.org/uniprot/O27605 O27605]
 +
** [http://www.uniprot.org/uniprot/Q58289 Q58289]
 +
** [http://www.uniprot.org/uniprot/Q43905 Q43905]
 +
** [http://www.uniprot.org/uniprot/P19077 P19077]
 +
** [http://www.uniprot.org/uniprot/P19078 P19078]
 +
** [http://www.uniprot.org/uniprot/P26248 P26248]
 +
** [http://www.uniprot.org/uniprot/P08718 P08718]
 +
** [http://www.uniprot.org/uniprot/Q00240 Q00240]
 +
** [http://www.uniprot.org/uniprot/Q00239 Q00239]
 +
** [http://www.uniprot.org/uniprot/P19068 P19068]
 +
** [http://www.uniprot.org/uniprot/P22921 P22921]
 +
** [http://www.uniprot.org/uniprot/P00457 P00457]
 +
** [http://www.uniprot.org/uniprot/P00464 P00464]
 +
** [http://www.uniprot.org/uniprot/P00468 P00468]
 +
** [http://www.uniprot.org/uniprot/P00459 P00459]
 +
** [http://www.uniprot.org/uniprot/P07328 P07328]
 +
** [http://www.uniprot.org/uniprot/P07329 P07329]
 +
** [http://www.uniprot.org/uniprot/P06662 P06662]
 +
** [http://www.uniprot.org/uniprot/P15052 P15052]
 +
** [http://www.uniprot.org/uniprot/P00456 P00456]
 +
** [http://www.uniprot.org/uniprot/P00467 P00467]
 +
** [http://www.uniprot.org/uniprot/P11347 P11347]
 +
** [http://www.uniprot.org/uniprot/P00458 P00458]
 +
** [http://www.uniprot.org/uniprot/P00466 P00466]
 +
** [http://www.uniprot.org/uniprot/P06119 P06119]
 +
** [http://www.uniprot.org/uniprot/P06121 P06121]
 +
** [http://www.uniprot.org/uniprot/P06117 P06117]
 +
** [http://www.uniprot.org/uniprot/P26507 P26507]
 +
** [http://www.uniprot.org/uniprot/P00465 P00465]
 +
** [http://www.uniprot.org/uniprot/P00462 P00462]
 +
** [http://www.uniprot.org/uniprot/P00460 P00460]
 +
** [http://www.uniprot.org/uniprot/P00461 P00461]
 +
** [http://www.uniprot.org/uniprot/Q43964 Q43964]
 +
** [http://www.uniprot.org/uniprot/Q52704 Q52704]
 +
** [http://www.uniprot.org/uniprot/Q52693 Q52693]
 +
** [http://www.uniprot.org/uniprot/Q59739 Q59739]
 +
** [http://www.uniprot.org/uniprot/Q52703 Q52703]
 +
** [http://www.uniprot.org/uniprot/P19066 P19066]
 +
** [http://www.uniprot.org/uniprot/P19067 P19067]
 +
** [http://www.uniprot.org/uniprot/P08625 P08625]
 +
** [http://www.uniprot.org/uniprot/P08624 P08624]
 +
** [http://www.uniprot.org/uniprot/P09553 P09553]
 +
** [http://www.uniprot.org/uniprot/P09552 P09552]
 +
** [http://www.uniprot.org/uniprot/P22548 P22548]
 +
** [http://www.uniprot.org/uniprot/P08738 P08738]
 +
** [http://www.uniprot.org/uniprot/P09554 P09554]
 +
** [http://www.uniprot.org/uniprot/P09555 P09555]
 +
** [http://www.uniprot.org/uniprot/P09772 P09772]
 +
** [http://www.uniprot.org/uniprot/P10996 P10996]
 +
** [http://www.uniprot.org/uniprot/P15332 P15332]
 +
** [http://www.uniprot.org/uniprot/P15333 P15333]
 +
** [http://www.uniprot.org/uniprot/P15334 P15334]
 +
** [http://www.uniprot.org/uniprot/P25767 P25767]
 +
** [http://www.uniprot.org/uniprot/P20620 P20620]
 +
** [http://www.uniprot.org/uniprot/P20622 P20622]
 +
** [http://www.uniprot.org/uniprot/P20623 P20623]
 +
** [http://www.uniprot.org/uniprot/P20621 P20621]
 +
** [http://www.uniprot.org/uniprot/P17303 P17303]
 +
** [http://www.uniprot.org/uniprot/P25313 P25313]
 +
** [http://www.uniprot.org/uniprot/P71330 P71330]
 +
** [http://www.uniprot.org/uniprot/Q02452 Q02452]
 +
** [http://www.uniprot.org/uniprot/P25314 P25314]
 +
** [http://www.uniprot.org/uniprot/Q46244 Q46244]
 +
** [http://www.uniprot.org/uniprot/Q07942 Q07942]
 +
** [http://www.uniprot.org/uniprot/Q07933 Q07933]
 +
** [http://www.uniprot.org/uniprot/Q07934 Q07934]
 +
** [http://www.uniprot.org/uniprot/Q07935 Q07935]
 +
** [http://www.uniprot.org/uniprot/Q47932 Q47932]
 +
** [http://www.uniprot.org/uniprot/Q47933 Q47933]
 +
** [http://www.uniprot.org/uniprot/Q51296 Q51296]
 +
** [http://www.uniprot.org/uniprot/Q51297 Q51297]
 +
** [http://www.uniprot.org/uniprot/Q50788 Q50788]
 +
** [http://www.uniprot.org/uniprot/Q44484 Q44484]
 +
** [http://www.uniprot.org/uniprot/Q44526 Q44526]
 +
** [http://www.uniprot.org/uniprot/Q50218 Q50218]
 +
** [http://www.uniprot.org/uniprot/P71526 P71526]
 +
** [http://www.uniprot.org/uniprot/P71527 P71527]
 +
</div>
 +
{{#set: ec-number=ec-1.18.6.1}}
 
{{#set: direction=left-to-right}}
 
{{#set: direction=left-to-right}}
−
{{#set: nb gene associated=2}}
+
{{#set: common-name=nitrogenase|nitrogenase iron protein}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb gene associated=6}}
 +
{{#set: nb pathway associated=1}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction comment=n.a}}
 
{{#set: reconstruction comment=n.a}}
−
{{#set: reconstruction source=genome}}
+
{{#set: reconstruction source=fibrobacter_succinogenes2|fibrobacter_succinogenes1}}

Revision as of 17:06, 14 October 2022

Reaction NITROGENASE-RXN

  • ec-number:
  • direction:
    • left-to-right
  • common-name:
    • nitrogenase iron protein
    • nitrogenase

Reaction formula

Gene(s) associated with this reaction

Pathway(s)

  • N2FIX-PWY, nitrogen fixation I (ferredoxin):
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links





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